Waiting times for clumps of patterns and for structured motifs in random sequences.
Valery T. StefanovStéphane RobinSophie SchbathPublished in: Discret. Appl. Math. (2007)
Keyphrases
- waiting times
- temporal patterns
- recurring patterns
- sequential patterns
- repeated patterns
- biological sequences
- transcription factor binding sites
- setup times
- bayesian networks
- motif discovery
- hidden markov models
- dna sequences
- scheduling problem
- pattern discovery
- frequent patterns
- protein families
- np hard
- finite buffer