Masher: Mapping Long(er) Reads with Hash-based Genome Indexing on GPUs.
Anas Abu-DolehErik SauleKamer KayaÜmit V. ÇatalyürekPublished in: BCB (2013)
Keyphrases
- information retrieval
- sequence data
- general purpose
- index tree
- parallel processing
- human genome
- indexing scheme
- graphics hardware
- real time
- sequence analysis
- multimedia retrieval
- indexing techniques
- graphics processing units
- transitive closure
- parallel programming
- nearest neighbor
- parallel architectures
- database systems
- database