PDB2Graph: A toolbox for identifying critical amino acids map in proteins based on graph theory.
Niloofar NiknamHamed KhakzadSeyed Shahriar ArabHossein Naderi-maneshPublished in: Comput. Biol. Medicine (2016)
Keyphrases
- graph theory
- protein structure prediction
- amino acids
- amino acid sequences
- protein structure
- graph theoretical
- secondary structure
- protein function
- protein sequences
- graph theoretic
- maximum independent set
- complex networks
- graph properties
- minimum spanning tree
- social network analysis
- maximal cliques
- physico chemical
- graph based representations
- protein folding
- physicochemical properties
- molecular biology
- search space
- high precision