Spectral Jaccard Similarity: A New Approach to Estimating Pairwise Sequence Alignments.
Tavor Z. BaharavGovinda M. KamathDavid N. C. TseIlan ShomoronyPublished in: Patterns (2020)
Keyphrases
- similarity measure
- pairwise
- sequence alignment
- global alignment
- similarity function
- similarity scores
- cosine similarity
- similarity metric
- multiple sequence alignments
- edit distance
- longest common subsequence
- loss function
- similarity computation
- distance measure
- multi class
- similarity matrix
- pairwise interactions
- similarity measurement
- feature vectors
- cosine measure
- pairwise similarities
- multiple alignment
- similarity metrics
- graph matching
- point sets
- markov random field
- semi supervised
- multispectral images
- pairwise constraints
- spectral analysis
- shape similarity
- multiple sequence alignment
- semantic similarity
- similarity search
- higher order
- spectral clustering
- temporal order
- sequence similarity
- euclidean distance