mkgridXf: Consistent Identification of Plausible Binding Sites Despite the Elusive Nature of Cavities and Grooves in Protein Dynamics.
Damien MonetNathan DesdouitsMichael NilgesArnaud BlondelPublished in: J. Chem. Inf. Model. (2019)
Keyphrases
- binding sites
- dna binding
- protein protein
- sequence alignment
- transcription factor binding sites
- regulatory elements
- drosophila melanogaster
- dna sequences
- gene expression
- protein interaction
- transcription factors
- sequence data
- mass spectrometry
- protein families
- influenza virus
- protein protein interactions
- computational methods
- genome wide
- high throughput
- biological sequences
- statistical significance
- motif discovery
- genome sequences
- regulatory networks
- protein sequences
- protein function
- genomic sequences
- predicting protein
- microarray
- transcriptional regulation
- saccharomyces cerevisiae
- amino acids
- protein structure
- cis regulatory