SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips.
Shoshana MarcusHayan LeeMichael C. SchatzPublished in: Bioinform. (2014)
Keyphrases
- experimental evaluation
- optimization algorithm
- objective function
- significant improvement
- learning algorithm
- times faster
- computational cost
- np hard
- preprocessing
- data analysis
- data sets
- detection algorithm
- image segmentation
- high accuracy
- particle swarm optimization
- improved algorithm
- optimal solution
- k means
- maximum likelihood
- simulated annealing
- theoretical analysis
- reinforcement learning
- clustering method
- matching algorithm
- computational complexity
- recognition algorithm
- selection algorithm