De Novo Clustering of Long-Read Transcriptome Data Using a Greedy, Quality Value-Based Algorithm.
Kristoffer SahlinPaul MedvedevPublished in: J. Comput. Biol. (2020)
Keyphrases
- k means
- clustering method
- dynamic programming
- data sets
- input data
- clustering analysis
- data reduction
- high quality
- data analysis
- learning algorithm
- noisy data
- spectral clustering
- similarity matrix
- clustering result
- synthetic datasets
- search space
- data quality
- detection algorithm
- objective function
- hierarchical clustering algorithm
- data points
- similarity measure
- optimal solution
- fuzzy clustering
- cluster centers
- hierarchical clustering
- subspace clustering
- cluster analysis
- greedy heuristic
- data structure
- training data
- large scale data sets
- motif discovery
- clustering ensemble
- greedy strategy
- quality measures
- distance metric
- expectation maximization
- data mining techniques
- simulated annealing
- probabilistic model
- data sources
- clustering algorithm
- data mining