GrAPFI: predicting enzymatic function of proteins from domain similarity graphs.
Bishnu SarkerDavid W. RitchieSabeur AridhiPublished in: BMC Bioinform. (2020)
Keyphrases
- protein structure alignment
- sequence similarity
- similarity measure
- domain independent
- protein protein interaction networks
- directed graph
- protein sequences
- graph theory
- computational methods
- similarity measurement
- similarity metric
- maximum common subgraph
- subcellular localization
- maximum clique
- chemical compounds
- protein function
- protein interaction networks
- graph databases
- graph model
- graph mining
- distance measure