A white-box approach to microarray probe response characterization: the BaFL pipeline.
Kevin J. ThompsonHrishikesh DeshmukhJeffrey L. SolkaJennifer W. WellerPublished in: BMC Bioinform. (2009)
Keyphrases
- microarray
- white box
- black box
- gene expression
- high throughput
- gene expression data
- microarray data
- source code
- gene expression profiling
- gene selection
- experimental conditions
- molecular biology
- gene expression analysis
- high dimensionality
- cancer classification
- gene ontology
- gene expression profiles
- microarray data analysis
- yeast cell cycle
- regulatory networks
- dna microarray
- test data
- gene expression data analysis
- differentially expressed genes
- cancer diagnosis
- gene networks
- gene expression datasets
- genome wide
- analysis of gene expression
- transcription factors
- tissue samples
- gene expression data sets
- machine learning
- dimensionality reduction
- clustering algorithm