Gapped Extension for Local Multiple Alignment of Interspersed DNA Repeats.
Todd J. TreangenAaron E. DarlingMark A. RaganXavier MesseguerPublished in: ISBRA (2008)
Keyphrases
- multiple alignment
- protein sequences
- sequence analysis
- multiple sequence alignment
- biological sequences
- computational biology
- secondary structure
- sequential pattern mining
- mining sequential patterns
- graph theoretic
- sequence alignment
- scoring function
- sequence databases
- binding sites
- amino acids
- dna sequences
- multi dimensional
- data structure
- frequent itemset mining
- memory efficient
- protein structure