Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API.
Thomas DesvignesPhillipe LoherKaren EilbeckJeffery MaGianvito UrgeseBastian FrommJason SydesErnesto Aparicio-PuertaVíctor BarreraRoderic EspínFlorian ThibordXavier Bofill-De RosEric LondinAristeidis G. TelonisElisa FicarraMarc R. FriedländerJohn H. PostlethwaitIsidore RigoutsosMichael HackenbergIoannis S. VlachosMarc K. HalushkaLorena PantanoPublished in: Bioinform. (2020)
Keyphrases
- gene expression
- secondary structure
- computational methods
- gene ontology
- regulatory networks
- binding sites
- genome wide
- gene regulation
- microarray data
- biological processes
- microarray
- gene function
- gene expression data
- microarray data analysis
- gene sets
- metadata
- statistical methods
- databases
- differentially expressed
- protein structure
- systems biology
- biological networks
- statistical significance
- gene expression profiles
- amino acids
- semantic similarity
- high throughput
- information theoretic
- high level