Taxonomic Classification with Maximal Exact Matches in KATKA Kernels and Minimizer Digests.
Dominika DraesslerováOmar AhmedTravis GagieJan HolubBen LangmeadGiovanni ManziniGonzalo NavarroPublished in: SEA (2024)
Keyphrases
- pattern recognition
- support vector machine
- support vector
- classification accuracy
- svm classification
- decision trees
- feature vectors
- feature space
- cost function
- classification systems
- classification method
- machine learning algorithms
- pattern classification
- supervised learning
- image classification
- training samples
- svm classifier
- classification rules
- feature selection
- classification process
- classification algorithm
- text classification
- feature extraction
- machine learning
- class labels
- benchmark datasets
- machine learning methods
- training set
- preprocessing
- classification models
- generalization ability
- classification scheme
- similarity measure
- string kernels
- protein classification
- labelled and unlabelled data