Tagging gene and protein names in full text articles.
Lorraine K. TanabeW. John WilburPublished in: ACL Workshop on Natural Language Processing in the Biomedical Domain (2002)
Keyphrases
- medline abstracts
- journal articles
- protein interaction
- biomedical literature
- sequence alignment
- homo sapiens
- manually annotated
- cellular processes
- protein protein interactions
- protein protein interaction networks
- biological entities
- metadata
- gene prediction
- nucleotide sequences
- regulatory networks
- genomic sequences
- interaction networks
- digital libraries
- keywords
- protein sequences
- information retrieval systems
- dna sequences
- amino acids
- medical subject headings
- gene expression
- protein structure
- annotated corpus
- gene networks
- sequence data
- signaling pathways
- microarray
- text mining
- biological knowledge
- computational methods
- saccharomyces cerevisiae
- protein folding
- mass spectrometry
- protein interaction networks
- news articles
- dna binding
- cis regulatory
- gene ontology terms
- transcription factor binding sites
- protein function
- protein structure prediction
- retrieval systems
- named entities
- gene ontology
- gene expression data
- gene regulatory networks
- computational approaches
- contact map
- experimental conditions
- feature selection
- drug design
- biological data
- molecular biology
- national library of medicine
- drug discovery
- gene expression profiles
- sequence analysis