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LongAGE: defining breakpoints of genomic structural variants through optimal and memory efficient alignments of long reads.

Quang TranAlexej Abyzov
Published in: Bioinform. (2021)
Keyphrases
  • memory efficient
  • multiple sequence alignment
  • dynamic programming
  • external memory
  • worst case
  • optimal solution
  • structural information
  • pairwise
  • object detection
  • high throughput
  • iterative deepening
  • pattern growth