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LongAGE: defining breakpoints of genomic structural variants through optimal and memory efficient alignments of long reads.
Quang Tran
Alexej Abyzov
Published in:
Bioinform. (2021)
Keyphrases
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memory efficient
multiple sequence alignment
dynamic programming
external memory
worst case
optimal solution
structural information
pairwise
object detection
high throughput
iterative deepening
pattern growth