Three-Dimensional Dynamic Programming Accelerator for Multiple Sequence Alignment.
Ruei-Ting ChienYi-Lun LiaoChien-An WangYu-Cheng LiYi-Chang LuPublished in: NORCAS (2018)
Keyphrases
- multiple sequence alignment
- dynamic programming
- three dimensional
- sequence alignment
- memory efficient
- protein sequences
- genetic algorithm
- computational biology
- multiple alignment
- biological sequences
- secondary structure
- state space
- greedy algorithm
- phylogenetic trees
- pairwise
- reinforcement learning
- search algorithm