Protein Folding in CLP(FD) with Empirical Contact Energies.
Alessandro Dal PalùAgostino DovierFederico FogolariPublished in: CSCLP (2003)
Keyphrases
- protein folding
- low energy
- secondary structure
- annealing algorithm
- constraint logic programming
- higher order
- molecular dynamics
- protein structure
- amino acids
- structural motifs
- protein sequences
- coarse grained
- protein structure prediction
- graph cuts
- machine learning
- building blocks
- markov random field
- parallel algorithm
- machine learning methods
- fine grained