An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots.
Jianhua RuanGary D. StormoWeixiong ZhangPublished in: Bioinform. (2004)
Keyphrases
- rna secondary structure prediction
- rna secondary structures
- edit distance
- rna sequences
- secondary structure
- stochastic context free grammars
- graph matching
- rna structures
- matching algorithm
- image matching
- pattern matching
- probabilistic model
- pairwise
- computational biology
- protein structure
- fixed point
- bayesian networks