Accelerating the base-level alignment step of DNA assembling in Minimap2 Algorithm using FPGA.
Carolina TengRenan W. AchjianCaio C. BragaMarcelo Knörich ZuffoWang Jiang ChauPublished in: LASCAS (2021)
Keyphrases
- learning algorithm
- times faster
- detection algorithm
- segmentation algorithm
- optimization algorithm
- objective function
- np hard
- high accuracy
- computational complexity
- cost function
- dynamic programming
- experimental evaluation
- hardware implementation
- linear programming
- image processing
- multi step
- image processing algorithms
- real time
- clustering method
- fpga implementation
- expectation maximization
- worst case
- image registration
- search space
- bayesian networks
- clustering algorithm