Multiple Sequence Alignment Containing a Sequence of Regular Expressions.
Abdullah N. ArslanPublished in: CIBCB (2005)
Keyphrases
- regular expressions
- multiple sequence alignment
- biological sequences
- pattern matching
- multiple alignment
- protein sequences
- memory efficient
- genetic algorithm
- secondary structure
- sequence alignment
- xml schema
- query language
- matching algorithm
- computational biology
- semistructured data
- frequent sequences
- query evaluation
- regular path queries
- graph databases
- integrity constraints
- knowledge base