Pairwise sequence alignment at arbitrarily large evolutionary distance.
Brandon LegriedSebastien RochPublished in: CoRR (2022)
Keyphrases
- sequence alignment
- pairwise
- multiple sequence alignment
- multiple sequence alignments
- markov random field
- comparative genomics
- distance measure
- pairwise distances
- genetic algorithm
- phylogenetic analysis
- gpu accelerated
- multiple alignment
- protein structure prediction
- amino acids
- euclidean distance
- similarity measure
- protein sequences
- dynamic programming
- distance function
- spectral clustering
- distance metric
- statistical analysis
- data sets