Spaced Seeds for Cross-species CDNA-to-genome Sequence Alignment.
Liliana FloreaIngrid MihaiLeming ZhouPublished in: Commun. Inf. Syst. (2010)
Keyphrases
- sequence alignment
- comparative genomics
- genomic sequences
- microarray data
- gene clusters
- phylogenetic analysis
- dna sequences
- pairwise
- microarray
- evolutionary history
- dynamic programming
- binding sites
- protein sequences
- amino acids
- multiple sequence alignment
- human genome
- microarray data analysis
- multiple alignment
- phylogenetic trees
- sequence databases
- high throughput
- gene expression
- gene expression analysis
- molecular biology
- microarray images
- gpu accelerated
- gene selection
- protein structure
- data sets