Improved detection of DNA motifs using a self-organized clustering of familial binding profiles.
Shaun MahonyAaron GoldenTerry J. SmithPanayiotis V. BenosPublished in: ISMB (Supplement of Bioinformatics) (2005)
Keyphrases
- dna sequences
- biological sequences
- dna binding
- k means
- anomaly detection
- binding sites
- clustering algorithm
- automatic detection
- detection algorithm
- clustering method
- object detection
- neural gas
- transcription factor binding sites
- hierarchical clustering
- data clustering
- detection rate
- document clustering
- neural network
- cis regulatory
- unsupervised learning
- cluster analysis
- rna sequences
- tandem repeats
- genome sequences
- categorical data
- small world
- sequence data
- user profiles
- false alarms
- information theoretic
- self organizing maps
- complex systems