Yu Takano

Publication Activity (10 Years)

Years Active: 2010-2022
Publications (10 Years): 9

Top Topics

Protein Folding

Secondary Structure

Top Venues

J. Comput. Chem.

Database J. Biol. Databases Curation

J. Chem. Inf. Model.

Publications

Hiroko X. Kondo, Masanori Fujii, Takuma Tanioka, Yusuke Kanematsu, Takashi Yoshida, Yu Takano
Global Analysis of Heme Proteins Elucidates the Correlation between Heme Distortion and the Heme-Binding Pocket. J. Chem. Inf. Model. 62 (4) (2022)
Hiroko X. Kondo, Yusuke Kanematsu, Gen Masumoto, Yu Takano
PyDISH: database and analysis tools for heme porphyrin distortion in heme proteins. Database J. Biol. Databases Curation 2020 (2020)
Hiroko X. Kondo, Ayumi Kusaka, Colin K. Kitakawa, Jinta Onari, Shusuke Yamanaka, Haruki Nakamura, Yu Takano
Hydrogen bond donors and acceptors are generally depolarized in α-helices as revealed by a molecular tailoring approach. J. Comput. Chem. 40 (23) (2019)
Yasuhiro Imada, Haruki Nakamura, Yu Takano
Density functional study of porphyrin distortion effects on redox potential of heme. J. Comput. Chem. 39 (3) (2018)
Ryuhei Harada, Yu Takano, Yasuteru Shigeta
Common folding processes of mini-proteins: Partial formations of secondary structures initiate the immediate protein folding. J. Comput. Chem. 38 (11) (2017)
Yusuke Kanematsu, Masanori Tachikawa, Yu Takano
Inverse Ubbelohde effect in the short hydrogen bond of photosystem II: Relation between H/D isotope effect and symmetry in potential energy profile. J. Comput. Chem. 37 (23) (2016)
Yu Takano, Kazuto Nakata, Yasushige Yonezawa, Haruki Nakamura
Development of massive multilevel molecular dynamics simulation program, platypus (PLATform for dYnamic protein unified simulation), for the elucidation of protein functions. J. Comput. Chem. 37 (12) (2016)
Ryuhei Harada, Tomotake Nakamura, Yu Takano, Yasuteru Shigeta
Protein folding pathways extracted by OFLOOD: Outlier FLOODing method. J. Comput. Chem. 36 (2) (2015)
Ryuhei Harada, Yu Takano, Yasuteru Shigeta
Enhanced conformational sampling method for proteins based on the TaBoo SeArch algorithm: Application to the folding of a mini-protein, chignolin. J. Comput. Chem. 36 (10) (2015)
Jinzen Ikebe, Koji Umezawa, Narutoshi Kamiya, Takanori Sugihara, Yasushige Yonezawa, Yu Takano, Haruki Nakamura, Junichi Higo
Theory for trivial trajectory parallelization of multicanonical molecular dynamics and application to a polypeptide in water. J. Comput. Chem. 32 (7) (2011)
Yu Takano, Haruki Nakamura
. J. Comput. Chem. 31 (5) (2010)