Woong-Hee Shin

Publication Activity (10 Years)

Years Active: 2011-2021
Publications (10 Years): 9

Top Topics

Virtual Screening

Grand Challenge

Global Optimization

Top Venues

J. Chem. Inf. Model.

J. Comput. Aided Mol. Des.

Pattern Recognit.

J. Comput. Chem.

Publications

Florent Langenfeld, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Genki Terashi, Xiao Wang, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Yonghuai Liu, Léa Sirugue, Huu-Nghia H. Nguyen, Tuan-Duy H. Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le, Hai-Dang Nguyen, Minh-Triet Tran, Matthieu Montès
SHREC 2021: Surface-based Protein Domains Retrieval. 3DOR (2021)
Andrea Raffo, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Yonghuai Liu, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Evangelia I. Zacharaki, Eleftheria Psatha, Dimitrios Laskos, Gerasimos Arvanitis, Konstantinos Moustakas, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Daisuke Kihara, Andrea Giachetti, Huu-Nghia Nguyen, Tuan-Duy Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le-Thanh, Hai-Dang Nguyen, Minh-Triet Tran
SHREC 2021: Retrieval and classification of protein surfaces equipped with physical and chemical properties. Comput. Graph. 99 (2021)
Woong-Hee Shin, Daisuke Kihara
Predicting binding poses and affinity ranking in D3R Grand Challenge using PL-PatchSurfer2.0. J. Comput. Aided Mol. Des. 33 (12) (2019)
Atilla Sit, Woong-Hee Shin, Daisuke Kihara
Three-dimensional Krawtchouk descriptors for protein local surface shape comparison. Pattern Recognit. 93 (2019)
Lenna X. Peterson, Yoichiro Togawa, Juan Esquivel-Rodríguez, Genki Terashi, Charles Christoffer, Amitava Roy, Woong-Hee Shin, Daisuke Kihara
Modeling the assembly order of multimeric heteroprotein complexes. PLoS Comput. Biol. 14 (1) (2018)
Minkyung Baek, Woong-Hee Shin, Hwan Won Chung, Chaok Seok
GalaxyDock BP2 score: a hybrid scoring function for accurate protein-ligand docking. J. Comput. Aided Mol. Des. 31 (7) (2017)
Woong-Hee Shin, Charles Christoffer, Ji-Bo Wang, Daisuke Kihara
PL-PatchSurfer2: Improved Local Surface Matching-Based Virtual Screening Method That Is Tolerant to Target and Ligand Structure Variation. J. Chem. Inf. Model. 56 (9) (2016)
Woong-Hee Shin, Gyu Rie Lee, Chaok Seok
Evaluation of GalaxyDock Based on the Community Structure-Activity Resource 2013 and 2014 Benchmark Studies. J. Chem. Inf. Model. 56 (6) (2016)
Xiaolei Zhu, Woong-Hee Shin, Hyungrae Kim, Daisuke Kihara
Combined Approach of Patch-Surfer and PL-PatchSurfer for Protein-Ligand Binding Prediction in CSAR 2013 and 2014. J. Chem. Inf. Model. 56 (6) (2016)
Lim Heo, Woong-Hee Shin, Myeong Sup Lee, Chaok Seok
GalaxySite: ligand-binding-site prediction by using molecular docking. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Woong-Hee Shin, Jae-Kwan Kim, Deok-Soo Kim, Chaok Seok
GalaxyDock2: Protein-ligand docking using beta-complex and global optimization. J. Comput. Chem. 34 (30) (2013)
Woong-Hee Shin, Chaok Seok
GalaxyDock: Protein-Ligand Docking with Flexible Protein Side-chains. J. Chem. Inf. Model. 52 (12) (2012)
Woong-Hee Shin, Lim Heo, Juyong Lee, Junsu Ko, Chaok Seok, Jooyoung Lee
LigDockCSA: Protein-ligand docking using conformational space annealing. J. Comput. Chem. 32 (15) (2011)