Vladimir N. Minin

Publication Activity (10 Years)

Years Active: 2005-2020
Publications (10 Years): 8

Top Topics

Population Size

Tandem Mass Spectrometry

Bayesian Nonparametric

Top Venues

PLoS Comput. Biol.

J. Comput. Biol.

Publications

Amrit Dhar, Duncan K. Ralph, Vladimir N. Minin, Frederick A. Matsen IV
A Bayesian phylogenetic hidden Markov model for B cell receptor sequence analysis. PLoS Comput. Biol. 16 (8) (2020)
Michael D. Karcher, Luiz Max Carvalho, Marc A. Suchard, Gytis Dudas, Vladimir N. Minin
Estimating effective population size changes from preferentially sampled genetic sequences. PLoS Comput. Biol. 16 (10) (2020)
Andrew F. Magee, Sebastian Höhna, Tetyana I. Vasylyeva, Adam D. Leaché, Vladimir N. Minin
Locally adaptive Bayesian birth-death model successfully detects slow and rapid rate shifts. PLoS Comput. Biol. 16 (10) (2020)
Amrit Dhar, Kristian Davidsen, Frederick A. Matsen IV, Vladimir N. Minin
Predicting B cell receptor substitution profiles using public repertoire data. PLoS Comput. Biol. 14 (10) (2018)
Amrit Dhar, Vladimir N. Minin
Calculating Higher-Order Moments of Phylogenetic Stochastic Mapping Summaries in Linear Time. J. Comput. Biol. 24 (5) (2017)
Michael D. Karcher, Julia A. Palacios, Trevor Bedford, Marc A. Suchard, Vladimir N. Minin
Quantifying and Mitigating the Effect of Preferential Sampling on Phylodynamic Inference. PLoS Comput. Biol. 12 (3) (2016)
Shiwei Lan, Julia A. Palacios, Michael D. Karcher, Vladimir N. Minin, Babak Shahbaba
An efficient Bayesian inference framework for coalescent-based nonparametric phylodynamics. Bioinform. 31 (20) (2015)
Jason Xu, Vladimir N. Minin
Effcient Transition Probability Computation for Continuous-Time Branching Processes via Compressed Sensing. UAI (2015)
Jan Irvahn, Vladimir N. Minin
Phylogenetic Stochastic Mapping Without Matrix Exponentiation. J. Comput. Biol. 21 (9) (2014)
Julia A. Palacios, Vladimir N. Minin
Integrated Nested Laplace Approximation for Bayesian Nonparametric Phylodynamics. UAI (2012)
Soyoung Ryu, David R. Goodlett, William S. Noble, Vladimir N. Minin
A statistical approach to peptide identification from clustered tandem mass spectrometry data. BIBM Workshops (2012)
Philippe Lemey, Vladimir N. Minin, Filip Bielejec, Sergei L. Kosakovsky Pond, Marc A. Suchard
A counting renaissance: combining stochastic mapping and empirical Bayes to quickly detect amino acid sites under positive selection. Bioinform. 28 (24) (2012)
Misha L. Rajaram, Vladimir N. Minin, Marc A. Suchard, Karin S. Dorman
Hot and Cold: Spatial Fluctuation in HIV-1 Recombination Rates. BIBE (2007)
Fang Fang, Jing Ding, Vladimir N. Minin, Marc A. Suchard, Karin S. Dorman
cBrother: relaxing parental tree assumptions for Bayesian recombination detection. Bioinform. 23 (4) (2007)
Vladimir N. Minin, Karin S. Dorman, Fang Fang, Marc A. Suchard
Dual multiple change-point model leads to more accurate recombination detection. Bioinform. 21 (13) (2005)