Vincent Mallet

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 12

Top Topics

Problems In Computational Biology

Protein Interaction

Sequence Similarity

Top Venues

J. Chem. Inf. Model.

Frontiers Bioinform.

Publications

Isaac Filella-Merce, Vincent Mallet, Eric Durand, Michael Nilges, Guillaume Bouvier, Riccardo Pellarin
AlignScape, displaying sequence similarity using self-organizing maps. Frontiers Bioinform. 4 (2024)
Carlos G. Oliver, Vincent Mallet, Jérôme Waldispühl
3D-based RNA function prediction tools in rnaglib. CoRR (2024)
Vincent Mallet, Souhaib Attaiki, Maks Ovsjanikov
AtomSurf : Surface Representation for Learning on Protein Structures. CoRR (2023)
Carlos G. Oliver, Dexiong Chen, Vincent Mallet, Pericles Philippopoulos, Karsten M. Borgwardt
Approximate Network Motif Mining Via Graph Learning. CoRR (2022)
Vincent Mallet, Luis Checa Ruano, Alexandra Moine-Franel, Michael Nilges, Karen Druart, Guillaume Bouvier, Olivier Sperandio
InDeep: 3D fully convolutional neural networks to assist in silico drug design on protein-protein interactions. Bioinform. 38 (5) (2022)
Vincent Mallet, Carlos G. Oliver, Jonathan Broadbent, William L. Hamilton, Jérôme Waldispühl
RNAglib: a python package for RNA 2.5 D graphs. Bioinform. 38 (5) (2022)
Carlos G. Oliver, Vincent Mallet, Pericles Philippopoulos, William L. Hamilton, Jérôme Waldispühl
Vernal: a tool for mining fuzzy network motifs in RNA. Bioinform. 38 (4) (2022)
Vincent Mallet, Jean-Philippe Vert
Reverse-Complement Equivariant Networks for DNA Sequences. NeurIPS (2021)
Vincent Mallet, Carlos G. Oliver, William L. Hamilton
Edge-similarity-aware Graph Neural Networks. CoRR (2021)
Jacques Boitreaud, Vincent Mallet, Carlos G. Oliver, Jérôme Waldispühl
OptiMol: Optimization of Binding Affinities in Chemical Space for Drug Discovery. J. Chem. Inf. Model. 60 (12) (2020)
Carlos G. Oliver, Vincent Mallet, Pericles Philippopoulos, William L. Hamilton, Jérôme Waldispühl
VeRNAl: A Tool for Mining Fuzzy Network Motifs in RNA. CoRR (2020)
Vincent Mallet, Carlos G. Oliver, Nicolas Moitessier, Jérôme Waldispühl
Leveraging binding-site structure for drug discovery with point-cloud methods. CoRR (2019)