Tyler W. H. Backman

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 6

Top Topics

Design Considerations

Highly Flexible

Simulation Software

Top Venues

Nucleic Acids Res.

J. Chem. Inf. Model.

Publications

Xavier B. Tao, Sarah Lafrance, Yifei Xing, Alberto A Nava, Héctor García Martín, Jay D. Keasling, Tyler W. H. Backman
ClusterCAD 2.0: an updated computational platform for chimeric type I polyketide synthase and nonribosomal peptide synthetase design. Nucleic Acids Res. 51 (D1) (2023)
Clara H. Eng, Tyler W. H. Backman, Constance B. Bailey, Christophe N. Magnan, Héctor García Martín, Leonard Katz, Pierre Baldi, Jay D. Keasling
ClusterCAD: a computational platform for type I modular polyketide synthase design. Nucleic Acids Res. 46 (Database-Issue) (2018)
Garrett W. Birkel, Amit Ghosh, Vinay Satish Kumar, Daniel Weaver, David Ando, Tyler W. H. Backman, Adam P. Arkin, Jay D. Keasling, Héctor García Martín
The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. BMC Bioinform. 18 (1) (2017)
Garrett W. Birkel, Amit Ghosh, Vinay Satish Kumar, Daniel Weaver, David Ando, Tyler W. H. Backman, Adam P. Arkin, Jay D. Keasling, Héctor García Martín
Erratum to: The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. BMC Bioinform. 18 (1) (2017)
Tyler W. H. Backman, Thomas Girke
bioassayR: Cross-Target Analysis of Small Molecule Bioactivity. J. Chem. Inf. Model. 56 (7) (2016)
Tyler W. H. Backman, Thomas Girke
systemPipeR: NGS workflow and report generation environment. BMC Bioinform. 17 (2016)
Yan Wang, Tyler W. H. Backman, Kevin Horan, Thomas Girke
fmcsR: mismatch tolerant maximum common substructure searching in R. Bioinform. 29 (21) (2013)
Tyler W. H. Backman, Yiqun Cao, Thomas Girke
ChemMine tools: an online service for analyzing and clustering small molecules. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Tyler W. H. Backman, Christopher M. Sullivan, Jason S. Cumbie, Zachary A. Miller, Elisabeth J. Chapman, Noah Fahlgren, Scott A. Givan, James C. Carrington, Kristin D. Kasschau
Small RNA Project database. Nucleic Acids Res. 36 (Database-Issue) (2008)