Tyler W. H. Backman

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 7

Top Topics

Top Venues

Nucleic Acids Res.

J. Chem. Inf. Model.

PLoS Comput. Biol.

Publications

Xavier B. Tao, Sarah Lafrance, Yifei Xing, Alberto A Nava, Héctor García Martín, Jay D. Keasling, Tyler W. H. Backman
ClusterCAD 2.0: an updated computational platform for chimeric type I polyketide synthase and nonribosomal peptide synthetase design. Nucleic Acids Res. 51 (D1) (2023)
Tyler W. H. Backman, Christina Schenk, Tijana Radivojevic, David Ando, Jahnavi Singh, Jeffrey J. Czajka, Zak Costello, Jay D. Keasling, Yinjie Tang, Elena V. Akhmatskaya, Héctor García Martín
BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale. PLoS Comput. Biol. 19 (11) (2023)
Clara H. Eng, Tyler W. H. Backman, Constance B. Bailey, Christophe N. Magnan, Héctor García Martín, Leonard Katz, Pierre Baldi, Jay D. Keasling
ClusterCAD: a computational platform for type I modular polyketide synthase design. Nucleic Acids Res. 46 (Database-Issue) (2018)
Garrett W. Birkel, Amit Ghosh, Vinay Satish Kumar, Daniel Weaver, David Ando, Tyler W. H. Backman, Adam P. Arkin, Jay D. Keasling, Héctor García Martín
The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. BMC Bioinform. 18 (1) (2017)
Garrett W. Birkel, Amit Ghosh, Vinay Satish Kumar, Daniel Weaver, David Ando, Tyler W. H. Backman, Adam P. Arkin, Jay D. Keasling, Héctor García Martín
Erratum to: The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. BMC Bioinform. 18 (1) (2017)
Tyler W. H. Backman, Thomas Girke
bioassayR: Cross-Target Analysis of Small Molecule Bioactivity. J. Chem. Inf. Model. 56 (7) (2016)
Tyler W. H. Backman, Thomas Girke
systemPipeR: NGS workflow and report generation environment. BMC Bioinform. 17 (2016)
Yan Wang, Tyler W. H. Backman, Kevin Horan, Thomas Girke
fmcsR: mismatch tolerant maximum common substructure searching in R. Bioinform. 29 (21) (2013)
Tyler W. H. Backman, Yiqun Cao, Thomas Girke
ChemMine tools: an online service for analyzing and clustering small molecules. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Tyler W. H. Backman, Christopher M. Sullivan, Jason S. Cumbie, Zachary A. Miller, Elisabeth J. Chapman, Noah Fahlgren, Scott A. Givan, James C. Carrington, Kristin D. Kasschau
Small RNA Project database. Nucleic Acids Res. 36 (Database-Issue) (2008)