Trent E. Balius

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 4

Top Topics

Autonomic Computing

Monotonicity Property

Global Consistency

Top Venues

J. Comput. Chem.

J. Chem. Inf. Model.

Publications

Trent E. Balius, Y. Stanley Tan, Mayukh Chakrabarti
DOCK 6: Incorporating hierarchical traversal through precomputed ligand conformations to enable large-scale docking. J. Comput. Chem. 45 (1) (2024)
Reed M. Stein, Ying Yang, Trent E. Balius, Matt J. O'meara, Jiankun Lyu, Jennifer Young, Khanh G. Tang, Brian K. Shoichet, John J. Irwin
Property-Unmatched Decoys in Docking Benchmarks. J. Chem. Inf. Model. 61 (2) (2021)
Chimno I. Nnadi, Meredith L. Jenkins, Daniel R. Gentile, Leslie A. Bateman, Daniel Zaidman, Trent E. Balius, Daniel K. Nomura, John E. Burke, Kevan M. Shokat, Nir London
Novel K-Ras G12C Switch-II Covalent Binders Destabilize Ras and Accelerate Nucleotide Exchange. J. Chem. Inf. Model. 58 (2) (2018)
William J. Allen, Brian C. Fochtman, Trent E. Balius, Robert C. Rizzo
design strategies for DOCK: Application to HIVgp41 and other therapeutic targets. J. Comput. Chem. 38 (30) (2017)
William J. Allen, Trent E. Balius, Sudipto Mukherjee, Scott R. Brozell, Demetri Moustakas, P. Therese Lang, David A. Case, Irwin D. Kuntz, Robert C. Rizzo
DOCK 6: Impact of new features and current docking performance. J. Comput. Chem. 36 (15) (2015)
Trent E. Balius, William J. Allen, Sudipto Mukherjee, Robert C. Rizzo
design: Application to HIVgp41. J. Comput. Chem. 34 (14) (2013)
Scott R. Brozell, Sudipto Mukherjee, Trent E. Balius, Daniel R. Roe, David A. Case, Robert C. Rizzo
Evaluation of DOCK 6 as a pose generation and database enrichment tool. J. Comput. Aided Mol. Des. 26 (6) (2012)
Trent E. Balius, Sudipto Mukherjee, Robert C. Rizzo
Implementation and evaluation of a docking-rescoring method using molecular footprint comparisons. J. Comput. Chem. 32 (10) (2011)
Sudipto Mukherjee, Trent E. Balius, Robert C. Rizzo
Docking Validation Resources: Protein Family and Ligand Flexibility Experiments. J. Chem. Inf. Model. 50 (11) (2010)