Thomas Wollmann

Publication Activity (10 Years)

Years Active: 2014-2023
Publications (10 Years): 23

Top Topics

Microscopy Images

Manifold Embedding

Usability Evaluation

Top Venues

Medical Image Anal.

Bildverarbeitung für die Medizin

Publications

Saskia Hiltemann, Helena Rasche, Simon L. Gladman, Hans-Rudolf Hotz, Delphine Larivière, Daniel J. Blankenberg, Pratik D. Jagtap, Thomas Wollmann, Anthony Bretaudeau, Nadia Goué, Timothy J. Griffin, Coline Royaux, Yvan Le Bras, Subina P. Mehta, Anna Syme, Frederik Coppens, Bert Droesbeke, Nicola Soranzo, Wendi A. Bacon, Fotis E. Psomopoulos, Cristóbal Gallardo-Alba, John Davis, Melanie Christine Föll, Matthias Fahrner, Maria A. Doyle, Beatriz Serrano-Solano, Anne Fouilloux, Peter van Heusden, Wolfgang Maier, Dave Clements, Florian Heyl, The Galaxy Team, Björn A. Grüning, Bérénice Batut
Galaxy Training: A powerful framework for teaching! PLoS Comput. Biol. 19 (1) (2023)
Johannes Otterbach, Thomas Wollmann
Chameleon: A Semi-AutoML framework targeting quick and scalable development and deployment of production-ready ML systems for SMEs. GI-Jahrestagung (2021)
Samuel von Baußnern, Johannes Otterbach, Adrian Loy, Mathieu Salzmann, Thomas Wollmann
DAAIN: Detection of Anomalous and Adversarial Input using Normalizing Flows. CoRR (2021)
Thomas Wollmann, Karl Rohr
Deep Consensus Network: Aggregating predictions to improve object detection in microscopy images. Medical Image Anal. 70 (2021)
Deepthi Sreenivasaiah, Thomas Wollmann
MEAL: Manifold Embedding-based Active Learning. CoRR (2021)
Johannes Otterbach, Thomas Wollmann
Chameleon: A Semi-AutoML framework targeting quick and scalable development and deployment of production-ready ML systems for SMEs. CoRR (2021)
Deepthi Sreenivasaiah, Johannes Otterbach, Thomas Wollmann
MEAL: Manifold Embedding-based Active Learning. ICCVW (2021)
Christian Ritter, Thomas Wollmann, Ji Young Lee, Andrea Imle, Barbara Müller, Oliver T. Fackler, Ralf Bartenschlager, Karl Rohr
Data fusion and smoothing for probabilistic tracking of viral structures in fluorescence microscopy images. Medical Image Anal. 73 (2021)
Christian Ritter, Thomas Wollmann, Ji Young Lee, Ralf Bartenschlager, Karl Rohr
Deep Learning Particle Detection for Probabilistic Tracking in Fluorescence Microscopy Images. ISBI (2020)
Thomas Wollmann, Manuel Gunkel, Inn Chung, Holger Erfle, Karsten Rippe, Karl Rohr
GRUU-Net: Integrated convolutional and gated recurrent neural network for cell segmentation. Medical Image Anal. 56 (2019)
Mitko Veta, Yujing J. Heng, Nikolas Stathonikos, Babak Ehteshami Bejnordi, Francisco Beca, Thomas Wollmann, Karl Rohr, Manan A. Shah, Dayong Wang, Mikaël Rousson, Martin Hedlund, David Tellez, Francesco Ciompi, Erwan Zerhouni, David Lanyi, Matheus Palhares Viana, Vassili Kovalev, Vitali Liauchuk, Josien P. W. Pluim
Predicting breast tumor proliferation from whole-slide images: The TUPAC16 challenge. Medical Image Anal. 54 (2019)
Thomas Wollmann, Christian Ritter, Jan-Niklas Dohrke, Ji Young Lee, Ralf Bartenschlager, Karl Rohr
Detnet: Deep Neural Network For Particle Detection In Fluorescence Microscopy Images. ISBI (2019)
Thomas Wollmann, Patrick Bernhard, Manuel Gunkel, Delia M. Braun, Jan Meiners, Ronald Simon, Guido Sauter, Holger Erfle, Karsten Rippe, Karl Rohr
Black-Box Hyperparameter Optimization for Nuclei Segmentation in Prostate Tissue Images. Bildverarbeitung für die Medizin (2019)
Christian Ritter, Thomas Wollmann, Patrick Bernhard, Manuel Gunkel, Delia M. Braun, Ji Young Lee, Jan Meiners, Ronald Simon, Guido Sauter, Holger Erfle, Karsten Rippe, Ralf Bartenschlager, Karl Rohr
Hyperparameter optimization for image analysis: application to prostate tissue images and live cell data of virus-infected cells. Int. J. Comput. Assist. Radiol. Surg. 14 (11) (2019)
Mitko Veta, Yujing J. Heng, Nikolas Stathonikos, Babak Ehteshami Bejnordi, Francisco Beca, Thomas Wollmann, Karl Rohr, Manan A. Shah, Dayong Wang, Mikaël Rousson, Martin Hedlund, David Tellez, Francesco Ciompi, Erwan Zerhouni, David Lanyi, Matheus Palhares Viana, Vassili Kovalev, Vitali Liauchuk, Hady Ahmady Phoulady, Talha Qaiser, Simon Graham, Nasir M. Rajpoot, Erik Sjöblom, Jesper Molin, Kyunghyun Paeng, Sangheum Hwang, Sunggyun Park, Zhipeng Jia, Eric I-Chao Chang, Yan Xu, Andrew H. Beck, Paul J. van Diest, Josien P. W. Pluim
Predicting breast tumor proliferation from whole-slide images: the TUPAC16 challenge. CoRR (2018)
D. Baltissen, Thomas Wollmann, Manuel Gunkel, Inn Chung, Holger Erfle, Karsten Rippe, Karl Rohr
Comparison of segmentation methods for tissue microscopy images of glioblastoma cells. ISBI (2018)
Thomas Wollmann, C. S. Eijkman, Karl Rohr
Adversarial domain adaptation to improve automatic breast cancer grading in lymph nodes. ISBI (2018)
Thomas Wollmann, Julia Ivanova, Manuel Gunkel, Inn Chung, Holger Erfle, Karsten Rippe, Karl Rohr
Multi-channel Deep Transfer Learning for Nuclei Segmentation in Glioblastoma Cell Tissue Images. Bildverarbeitung für die Medizin (2018)
Roman Spilger, Thomas Wollmann, Yu Qiang, Andrea Imle, Ji Young Lee, Barbara Müller, Oliver T. Fackler, Ralf Bartenschlager, Karl Rohr
Deep Particle Tracker: Automatic Tracking of Particles in Fluorescence Microscopy Images Using Deep Learning. DLMIA/ML-CDS@MICCAI (2018)
Thomas Wollmann, Karl Rohr
Automatic Grading of Breast Cancer Whole-Slide Histopathology Images. Bildverarbeitung für die Medizin (2017)
Thomas Wollmann, Karl Rohr
Deep residual Hough voting for mitotic cell detection in histopathology images. ISBI (2017)
Thomas Wollmann, Karl Rohr
Automatic breast cancer grading in lymph nodes using a deep neural network. CoRR (2017)
Thomas Wollmann, Farhad Abtahi, Aboozar Eghdam, Fernando Seoane, Kaj Lindecrantz, Martin Haag, Sabine Koch
User-Centred Design and Usability Evaluation of a Heart Rate Variability Biofeedback Game. IEEE Access 4 (2016)
Nicola Marsden, Thomas Wollmann, Britta Lohmann, Gerrit Meixner
Formative Evaluation of Smartwatch Exergaming. Mensch & Computer Workshopband (2015)
Friedrich Pawelka, Thomas Wollmann, Jakob Stöber, Tommy Vinh Lam
Erfolgreiches Lernen durch gamifiziertes E-Learning. GI-Jahrestagung (2014)