Simin He

Publication Activity (10 Years)

Years Active: 1999-2012
Publications (10 Years): 0

Top Topics

Protein Folding

Tandem Mass Spectrometry

Top Venues

Publications

Wenli Zhang, Hao Chi, Yuanzheng Lu, Yuqing Huang, Xiaofang Zhao, Simin He
Preliminary Search Engine for Open Protein Identification. PDCAT (2012)
Xiang Chen, Simin He, Dongbo Bu, Fa Zhang, Zhiyong Wang, Runsheng Chen, Wen Gao
FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space. Bioinform. 24 (18) (2008)
Simin He, Shutao Sun, Hong-Tao Guan, Qiang Zheng, Youjian Zhao, Wen Gao
On guaranteed smooth switching for buffered crossbar switches. IEEE/ACM Trans. Netw. 16 (3) (2008)
Yan Fu, Wen Gao, Simin He, Ruixiang Sun, Hu Zhou, Rong Zeng
Mining Tandem Mass Spectral Data to Develop a More Accurate Mass Error Model for Peptide Identification. Pacific Symposium on Biocomputing (2007)
Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, Wen Gao
A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots. BIBE (2007)
Yi Wang, Simin He, Youjian Zhao, Qiang Zheng, Wen Gao
Practical Algorithms of Bandwidth Regulation for Rate-Based Switching. GLOBECOM (2007)
Shutao Sun, Simin He, Wen Gao
Throughput analysis of a buffered crossbar switch with multiple input queues under burst traffic. IEEE Commun. Lett. 10 (4) (2006)
Dequan Li, Wen Gao, Charles X. Ling, Xiaobiao Wang, Ruixiang Sun, Simin He
IndexToolkit: an open source toolbox to index protein databases for high-throughput proteomics. Bioinform. 22 (20) (2006)
Haipeng Wang, Yan Fu, Ruixiang Sun, Simin He, Rong Zeng, Wen Gao
An SVM Scorer for More Sensitive and Reliable Peptide Identification via Tandem Mass Spectrometry. Pacific Symposium on Biocomputing (2006)
Qiang Zheng, Simin He, Shutao Sun, Yanfeng Zheng, Wen Gao
Switch Simulations Based on Workload Pattern Generation and Smoothed Periodic Input. ICCCN (2006)
Simin He, Shutao Sun, Wei Zhao, Yanfeng Zheng, Wen Gao
Smooth switching problem in buffered crossbar switches. SIGMETRICS (2005)
Yanfeng Zheng, Simin He, Shutao Sun, Wen Gao
Parallelized scheduling algorithm for input queued switches using local search technique. IPCCC (2005)
Kui Gao, Wen Gao, Simin He, Yuan Zhang
Real-time smoothing for network adaptive video streaming. J. Vis. Commun. Image Represent. 16 (4-5) (2005)
Yanfeng Zheng, Simin He, Shutao Sun, Wen Gao
Scheduling Algorithms for Input Queued Switches Using Local Search Technique. ICN (1) (2005)
Dequan Li, Yan Fu, Ruixiang Sun, Charles X. Ling, Yonggang Wei, Hu Zhou, Rong Zeng, Qiang Yang, Simin He, Wen Gao
pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry. Bioinform. 21 (13) (2005)
Jingfen Zhang, Wen Gao, Jinjin Cai, Simin He, Rong Zeng, Runsheng Chen
Predicting Molecular Formulas of Fragment Ions with Isotope Patterns in Tandem Mass Spectra. IEEE ACM Trans. Comput. Biol. Bioinform. 2 (3) (2005)
Yan Fu, Ruixiang Sun, Qiang Yang, Simin He, Chunli Wang, Haipeng Wang, Shiguang Shan, Junfa Liu, Wen Gao
A block-based support vector machine approach to the protein homology prediction task in KDD Cup 2004. SIGKDD Explor. 6 (2) (2004)
Shutao Sun, Youjian Zhao, Simin He, Yanfeng Zheng, Wen Gao
Distributed load adaptive scheduling for high speed input queued switch. GLOBECOM (2004)
Yan Fu, Qiang Yang, Charles X. Ling, Haipeng Wang, Dequan Li, Ruixiang Sun, Hu Zhou, Rong Zeng, Yiqiang Chen, Simin He, Wen Gao
A Kernel-Based Case Retrieval Algorithm with Application to Bioinformatics. PRICAI (2004)
Kui Gao, Wen Gao, Simin He, Yuan Zhang
Real-time scheduling based on imprecise computation for scalable streaming media system over the Internet. Real Time Imaging 10 (5) (2004)
Shutao Sun, Simin He, Yanfeng Zheng, Wen Gao
Multiple-threshold based scheduling algorithm for high performance input queued switches. ICON (2004)
Kui Gao, Wen Gao, Simin He, Yuan Zhang
Online smoothing for scalable media stream delivery. VCIP (2004)
Shutao Sun, Simin He, Wen Gao, Bin Pang
Multiscale load adaptive scheduling for energy efficient transmission over wireless networks. PIMRC (2003)
Kui Gao, Wen Gao, Simin He, Yuan Zhang
Real-time scheduling and online resource allocation on scalable streaming media server. VCIP (2003)
Kui Gao, Wen Gao, Simin He, Peng Gao, Yuan Zhang
Real-time scheduling on scalable media stream delivery. ISCAS (2) (2003)
Kui Gao, Yuan Zhang, Wen Gao, Simin He
Real-time scheduling supporting VCR functionality for scalable video streaming. PIMRC (2003)
Simin He, Bo Zhang
Solving SAT by algorithm transform of Wu's method. J. Comput. Sci. Technol. 14 (5) (1999)