Sara Mostafavi

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 6

Top Topics

Drosophila Melanogaster

Gene Expression

Top Venues

PLoS Comput. Biol.

Nat. Mach. Intell.

Publications

Addie Woicik, Mingxin Zhang, Hanwen Xu, Sara Mostafavi, Sheng Wang
Gemini: memory-efficient integration of hundreds of gene networks with high-order pooling. Bioinform. 39 (Supplement-1) (2023)
Xinming Tu, Zhi-Jie Cao, Chenrui Xia, Sara Mostafavi, Ge Gao
Cross-Linked Unified Embedding for cross-modality representation learning. NeurIPS (2022)
Shinya Tasaki, Chris Gaiteri, Sara Mostafavi, Yanling Wang
Deep learning decodes the principles of differential gene expression. Nat. Mach. Intell. 2 (7) (2020)
Evan Gatev, Nicole Gladish, Sara Mostafavi, Michael S. Kobor
CoMeBack: DNA methylation array data analysis for co-methylated regions. Bioinform. 36 (9) (2020)
Ellis Patrick, Mariko Taga, Ayla Ergün, Bernard Ng, William Casazza, Maria Cimpean, Christina Yung, Julie A. Schneider, David A. Bennett, Chris Gaiteri, Philip L. De Jager, Elizabeth M. Bradshaw, Sara Mostafavi
Deconvolving the contributions of cell-type heterogeneity on cortical gene expression. PLoS Comput. Biol. 16 (8) (2020)
Lauren Erdman, Ekansh Sharma, Eva Unternaehrer, Shantala A. Hari Dass, Kieran J. O'Donnell, Sara Mostafavi, Rachel Edgar, Michael S. Kobor, Hélène Gaudreau, Michael J. Meaney, Anna Goldenberg
Modeling trajectories of mental health: challenges and opportunities. CoRR (2016)
Emma Pierson, Daphne Koller, Alexis Battle, Sara Mostafavi
Sharing and Specificity of Co-expression Networks across 35 Human Tissues. PLoS Comput. Biol. 11 (5) (2015)
Sara Mostafavi, Quaid Morris
Using the Gene Ontology Hierarchy when Predicting Gene Function CoRR (2012)
Anna Goldenberg, Sara Mostafavi, Gerald T. Quon, Paul C. Boutros, Quaid Morris
Unsupervised detection of genes of influence in lung cancer using biological networks. Bioinform. 27 (22) (2011)
Simon Knott, Sara Mostafavi, Parvin Mousavi
A neural network based modeling and validation approach for identifying gene regulatory networks. Neurocomputing 73 (13-15) (2010)
David Warde-Farley, Sylva L. Donaldson, Ovi Comes, Khalid Zuberi, Rashad Badrawi, Pauline Chao, Max Franz, Chris Grouios, Farzana Kazi, Christian Tannus Lopes, Anson Maitland, Sara Mostafavi, Jason Montojo, Quentin Shao, George Wright, Gary D. Bader, Quaid Morris
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Sara Mostafavi, Quaid Morris
Fast integration of heterogeneous data sources for predicting gene function with limited annotation. Bioinform. 26 (14) (2010)
Sara Mostafavi, Quaid Morris
Using the Gene Ontology Hierarchy when Predicting Gene Function. UAI (2009)
Sara Mostafavi, Sergio Baranzini, Jorge Oksenberg, Parvin Mousavi
A Fast Multivariate Feature-Selection/Classification Approach for Prediction of Therapy Response in Multiple Sclerosis. CIBCB (2006)
Simon Knott, Sara Mostafavi, Parvin Mousavi
A Neural Network Based Approach for Inference and Verification of Transcriptional Regulatory Interactions. EMBC (2006)
Sara Mostafavi, Sergio Baranzini, Jorge Oksernberg, Parvin Mousavi
Predictive modeling of therapy response in multiple sclerosis using gene expression data. EMBC (2006)