Sandeep Patel

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 4

Top Topics

Molecular Dynamics

Top Venues

J. Comput. Chem.

Signal Process.

IEEE Trans. Circuits Syst. I Regul. Pap.

Publications

Sandeep Patel, Ravindra Dhuli, Brejesh Lall
Reconstruction of a signal from multirate observations: A recursive approach. Signal Process. 210 (2023)
Ayan Kumar Dutta, Shiv Dutt Joshi, Sandeep Patel, Brejesh Lall
Measures for the Degree of Time Variance: Application to Filter Banks. IEEE Access 10 (2022)
Sandeep Patel, Ravindra Dhuli, Brejesh Lall
Analysis of Signals via Non-Maximally Decimated Non-Uniform Filter Banks. IEEE Trans. Circuits Syst. I Regul. Pap. (10) (2019)
Sudipta Kumar Sinha, Mohit Mehta, Sandeep Patel
A charge equilibration formalism for treating charge transfer effects in MD simulations: Application to water clusters. J. Comput. Chem. 38 (16) (2017)
Shuching Ou, Di Cui, Matthew Wezowicz, Michela Taufer, Sandeep Patel
Free energetics of carbon nanotube association in aqueous inorganic NaI salt solutions: Temperature effects using all-atom molecular dynamics simulations. J. Comput. Chem. 36 (16) (2015)
Samuel Schlachter, Stephen Herbein, Shuching Ou, Jeremy S. Logan, Sandeep Patel, Michela Taufer
Pursuing Coordinated Trajectory Progression and Efficient Resource Utilization of GPU-Enabled Molecular Dynamics Simulations. IEEE Des. Test 31 (1) (2014)
Sandeep Patel, Ravindra Dhuli, Brejesh Lall
Design and analysis of matrix Wiener synthesis filter for multirate filter bank. Signal Process. 102 (2014)
Matthew Wezowicz, Trilce Estrada, Sandeep Patel, Michela Taufer
Performance Dissection of a Molecular Dynamics Code across CUDA and GPU Generations. IPDPS Workshops (2013)
Samuel Schlachter, Stephen Herbein, Michela Taufer, Shuching Ou, Sandeep Patel, Jeremy S. Logan
Efficient SDS Simulations on Multi-GPU Nodes of XSEDE High-End Clusters. e-Science (2013)
Michela Taufer, Narayan Ganesan, Sandeep Patel
GPU-Enabled Macromolecular Simulation: Challenges and Opportunities. Comput. Sci. Eng. 15 (1) (2013)
Yang Zhong, Sandeep Patel
-acetyl-β-glucosamine in hen egg white lysozyme using molecular dynamics with a polarizable force field. J. Comput. Chem. 34 (3) (2013)
Timothy R. Lucas, Brad A. Bauer, Joseph E. Davis, Sandeep Patel
Molecular dynamics simulation of hydrated DPPC monolayers using charge equilibration force fields. J. Comput. Chem. 33 (2) (2012)
Yang Zhong, Brad A. Bauer, Sandeep Patel
-acetyl-β-glucosamine: Molecular dynamics study incorporating electrostatic polarization. J. Comput. Chem. 32 (16) (2011)
Narayan Ganesan, Brad A. Bauer, Timothy R. Lucas, Sandeep Patel, Michela Taufer
Structural, dynamic, and electrostatic properties of fully hydrated DMPC bilayers from molecular dynamics simulations accelerated with graphical processing units (GPUs). J. Comput. Chem. 32 (14) (2011)
Brad A. Bauer, Joseph E. Davis, Michela Taufer, Sandeep Patel
Molecular dynamics simulations of aqueous ions at the liquid-vapor interface accelerated using graphics processors. J. Comput. Chem. 32 (3) (2011)
Narayan Ganesan, Michela Taufer, Brad A. Bauer, Sandeep Patel
FENZI: GPU-Enabled Molecular Dynamics Simulations of Large Membrane Regions Based on the CHARMM Force Field and PME. IPDPS Workshops (2011)
Michela Taufer, Omar Padron, Philip Saponaro, Sandeep Patel
Improving numerical reproducibility and stability in large-scale numerical simulations on GPUs. IPDPS (2010)
Joseph E. Davis, Adnan Ozsoy, Sandeep Patel, Michela Taufer
Towards Large-Scale Molecular Dynamics Simulations on Graphics Processors. BICoB (2009)
Yang Zhong, G. Lee Warren, Sandeep Patel
Thermodynamic and structural properties of methanol-water solutions using nonadditive interaction models. J. Comput. Chem. 29 (7) (2008)
Sandeep Patel, Charles L. Brooks III
CHARMM fluctuating charge force field for proteins: I parameterization and application to bulk organic liquid simulations. J. Comput. Chem. 25 (1) (2004)
Sandeep Patel, Alexander D. MacKerell Jr., Charles L. Brooks III
CHARMM fluctuating charge force field for proteins: II Protein/solvent properties from molecular dynamics simulations using a nonadditive electrostatic model. J. Comput. Chem. 25 (12) (2004)