Sam Henry

Publication Activity (10 Years)

Years Active: 2016-2022
Publications (10 Years): 19

Top Topics

Indirect Association

Natural Language Processing

Word Sense Disambiguation

Top Venues

J. Am. Medical Informatics Assoc.

J. Biomed. Informatics

Publications

Kahyun Lee, Mehmet Kayaalp, Sam Henry, Özlem Uzuner
A Context-Enhanced De-identification System. ACM Trans. Comput. Heal. 3 (1) (2022)
Sam Henry, Yanshan Wang, Feichen Shen, Özlem Uzuner
Corrigendum to: The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records. J. Am. Medical Informatics Assoc. 28 (11) (2021)
Sam Henry, D. Shanaka Wijesinghe, Aidan Myers, Bridget T. McInnes
Using Literature Based Discovery to Gain Insights Into the Metabolomic Processes of Cardiac Arrest. Frontiers Res. Metrics Anal. 6 (2021)
Jooyeon Lee, Huong Dang, Özlem Uzuner, Sam Henry
MNLP at MEDIQA 2021: Fine-Tuning PEGASUS for Consumer Health Question Summarization. BioNLP@NAACL-HLT (2021)
Kahyun Lee, Mehmet Kayaalp, Sam Henry, Özlem Uzuner
A Context-Enhanced De-identification System. CoRR (2021)
Paul Barry, Sam Henry, Meliha Yetisgen, Bridget T. McInnes, Özlem Uzuner
Jointly Learning Clinical Entities and Relations with Contextual Language Models and Explicit Context. CoRR (2021)
Paul Barry, Sam Henry, Meliha Yetisgen, Bridget T. McInnes, Özlem Uzuner
Jointly Learning Clinical Entities and Relations with Contextual Language Models and Explicit Context. AMIA (2020)
Sam Henry, Kevin Buchan, Michele Filannino, Amber Stubbs, Özlem Uzuner
2018 n2c2 shared task on adverse drug events and medication extraction in electronic health records. J. Am. Medical Informatics Assoc. 27 (1) (2020)
Fatemah Husain, Jooyeon Lee, Sam Henry, Özlem Uzuner
SalamNET at SemEval-2020 Task 12: Deep Learning Approach for Arabic Offensive Language Detection. SemEval@COLING (2020)
Huong Dang, Kahyun Lee, Sam Henry, Özlem Uzuner
Ensemble BERT for Classifying Medication-mentioning Tweets. SMM4H@COLING (2020)
Kahyun Lee, Sam Henry, Özlem Uzuner
Medical Concept Normalization via Description Prediction. AMIA (2020)
Sam Henry, Yanshan Wang, Feichen Shen, Özlem Uzuner
The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records. J. Am. Medical Informatics Assoc. 27 (10) (2020)
Sam Henry, Bridget T. McInnes
Indirect association and ranking hypotheses for literature based discovery. BMC Bioinform. 20 (1) (2019)
Sam Henry, Alex McQuilkin, Bridget T. McInnes
Association measures for estimating semantic similarity and relatedness between biomedical concepts. Artif. Intell. Medicine 93 (2019)
Sam Henry, Clint Cuffy, Bridget T. McInnes
Vector representations of multi-word terms for semantic relatedness. J. Biomed. Informatics 77 (2018)
Sam Henry, Bridget T. McInnes
Literature Based Discovery: Models, methods, and trends. J. Biomed. Informatics 74 (2017)
Sam Henry, Bridget T. McInnes
Semantic Association for Literature Based Discovery. AMIA (2017)
Sam Henry, Clint Cuffy, Bridget T. McInnes
Evaluating Feature Extraction Methods for Knowledge-based Biomedical Word Sense Disambiguation. BioNLP (2017)
Sam Henry, Allison Sands
VRep at SemEval-2016 Task 1 and Task 2: A System for Interpretable Semantic Similarity. SemEval@NAACL-HLT (2016)