Richard A. Friesner

Publication Activity (10 Years)

Years Active: 1996-2023
Publications (10 Years): 3

Top Topics

Deterministic Annealing

Virtual Screening

Top Venues

J. Comput. Chem.

J. Chem. Inf. Model.

Publications

Wei Chen, Di Cui, Steven V. Jerome, Mayako Michino, Eelke B. Lenselink, David J. Huggins, Alexandre Beautrait, Jeremie Vendome, Robert Abel, Richard A. Friesner, Lingle Wang
Enhancing Hit Discovery in Virtual Screening through Absolute Protein-Ligand Binding Free-Energy Calculations. J. Chem. Inf. Model. 63 (10) (2023)
Yixiang X. Cao, Mathew D. Halls, Tati Reddy Vadicherla, Richard A. Friesner
Pseudospectral implementations of long-range corrected density functional theory. J. Comput. Chem. 42 (29) (2021)
Yixiang X. Cao, Thomas Hughes, Dave Giesen, Mathew D. Halls, Alexander Goldberg, Tati Reddy Vadicherla, G. Madhavi Sastry, Bhargav Patel, Woody Sherman, Andrew L. Weisman, Richard A. Friesner
Highly efficient implementation of pseudospectral time-dependent density-functional theory for the calculation of excitation energies of large molecules. J. Comput. Chem. 37 (16) (2016)
Thomas B. Steinbrecher, Markus K. Dahlgren, Daniel Cappel, Teng Lin, Lingle Wang, Goran Krilov, Robert Abel, Richard A. Friesner, Woody Sherman
Accurate Binding Free Energy Predictions in Fragment Optimization. J. Chem. Inf. Model. 55 (11) (2015)
Matthew P. Repasky, Robert B. Murphy, Jay L. Banks, Jeremy R. Greenwood, Ivan Tubert-Brohman, Sathesh Bhat, Richard A. Friesner
Docking performance of the glide program as evaluated on the Astex and DUD datasets: a complete set of glide SP results and selected results for a new scoring function integrating WaterMap and glide. J. Comput. Aided Mol. Des. 26 (6) (2012)
K. Shawn Watts, Pranav Dalal, Robert B. Murphy, Woody Sherman, Richard A. Friesner, John C. Shelley
ConfGen: A Conformational Search Method for Efficient Generation of Bioactive Conformers. J. Chem. Inf. Model. 50 (4) (2010)
Zhiyong Zhou, Anthony K. Felts, Richard A. Friesner, Ronald M. Levy
Comparative Performance of Several Flexible Docking Programs and Scoring Functions: Enrichment Studies for a Diverse Set of Pharmaceutically Relevant Targets. J. Chem. Inf. Model. 47 (4) (2007)
Zhiyun Yu, Matthew P. Jacobson, Richard A. Friesner
What role do surfaces play in GB models? A new-generation of surface-generalized born model based on a novel gaussian surface for biomolecules. J. Comput. Chem. 27 (1) (2006)
Steven L. Dixon, Alexander M. Smondyrev, Eric H. Knoll, Shashidhar N. Rao, David E. Shaw, Richard A. Friesner
PHASE: a new engine for pharmacophore perception, 3D QSAR model development, and 3D database screening: 1. Methodology and preliminary results. J. Comput. Aided Mol. Des. 20 (10-11) (2006)
Jay L. Banks, Hege S. Beard, Yixiang X. Cao, Art E. Cho, Wolfgang Damm, Ramy Farid, Anthony K. Felts, Thomas A. Halgren, Daniel T. Mainz, Jon R. Maple, Robert B. Murphy, Dean M. Philipp, Matthew P. Repasky, Linda Yu Zhang, Bruce J. Berne, Richard A. Friesner, Emilio Gallicchio, Ronald M. Levy
Integrated Modeling Program, Applied Chemical Theory (IMPACT). J. Comput. Chem. 26 (16) (2005)
Art E. Cho, Victor Guallar, Bruce J. Berne, Richard A. Friesner
Importance of accurate charges in molecular docking: Quantum mechanical/molecular mechanical (QM/MM) approach. J. Comput. Chem. 26 (9) (2005)
George A. Kaminski, Richard A. Friesner, Ruhong Zhou
A computationally inexpensive modification of the point dipole electrostatic polarization model for molecular simulations. J. Comput. Chem. 24 (3) (2003)
George A. Kaminski, Harry A. Stern, Bruce J. Berne, Richard A. Friesner, Yixiang X. Cao, Robert B. Murphy, Ruhong Zhou, Thomas A. Halgren
Development of a polarizable force field for proteins via ab initio quantum chemistry: First generation model and gas phase tests. J. Comput. Chem. 23 (16) (2002)
Linda Yu Zhang, Emilio Gallicchio, Richard A. Friesner, Ronald M. Levy
Solvent models for protein-ligand binding: Comparison of implicit solvent poisson and surface generalized born models with explicit solvent simulations. J. Comput. Chem. 22 (6) (2001)
Robert B. Murphy, Dean M. Philipp, Richard A. Friesner
A mixed quantum mechanics/molecular mechanics (QM/MM) method for large-scale modeling of chemistry in protein environments. J. Comput. Chem. 21 (16) (2000)
Dean M. Philipp, Richard A. Friesner
Mixed ab initio QM/MM modeling using frozen orbitals and tests with alanine dipeptide and tetrapeptide. J. Comput. Chem. 20 (14) (1999)
David Chasman, Michael D. Beachy, Limin Wang, Richard A. Friesner
Parallel pseudospectral electronic structure: I. Hartree-Fock calculations. J. Comput. Chem. 19 (9) (1998)
Michael D. Beachy, David Chasman, Richard A. Friesner, Robert B. Murphy
Parallel pseudospectral electronic structure: II. Localized Møller-Plesset calculations. J. Comput. Chem. 19 (9) (1998)
Christian M. Cortis, Richard A. Friesner
Numerical solution of the Poisson-Boltzmann equation using tetrahedral finite-element meshes. J. Comput. Chem. 18 (13) (1997)
Christian M. Cortis, Richard A. Friesner
An automatic three-dimensional finite element mesh generation system for the Poisson-Boltzmann equation. J. Comput. Chem. 18 (13) (1997)
John R. Gunn, Richard A. Friesner
Parallel implementation of a protein structure refinement algorithm. J. Comput. Chem. 17 (10) (1996)