Rency S. Varghese

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 11

Top Topics

Post Transcriptional

Prior Knowledge

Gene Expression

Top Venues

Publications

Hoi Yan Katharine Chau, Hongyu Ao, Xinran Zhang, Shijinqiu Gao, Rency S. Varghese, Habtom W. Ressom
Deep Learning Based Metabolite Annotation. EMBC (2023)
Yichen Guo, Marie Denis, Rency S. Varghese, Sidharth S. Jain, Mahlet G. Tadesse, Habtom W. Ressom
Bayesian Approach Integrating Prior Knowledge for Identifying miRNA-mRNA Interactions in Hepatocellular Carcinoma. BIBM (2023)
Sidharth S. Jain, Megan E. Barefoot, Rency S. Varghese, Habtom W. Ressom
Cell-type Deconvolution and Age Estimation Using DNA Methylation Reveals NK Cell Deficiency in the Hepatocellular Carcinoma Microenvironment. BIBM (2022)
Marie Denis, Rency S. Varghese, Megan E. Barefoot, Mahlet G. Tadesse, Habtom W. Ressom
A Bayesian two-step integrative procedure incorporating prior knowledge for the identification of miRNA-mRNAs involved in hepatocellular carcinoma. EMBC (2022)
Yifan Chen, Megan E. Barefoot, Rency S. Varghese, Kuijun Wang, Cristina Di Poto, Habtom W. Ressom
Integrative Analysis to Identify Race-Associated Metabolite Biomarkers for Hepatocellular Carcinoma. EMBC (2020)
Rency S. Varghese, Yuan Zhou, Yifan Chen, Megan E. Barefoot, Mahlet G. Tadesse, Habtom W. Ressom
Epigenetic changes associated with mechanisms of disparities in hepatocellular carcinoma. EMBC (2020)
Megan E. Barefoot, Yifan Chen, Rency S. Varghese, Yuan Zhou, Habtom W. Ressom
Integrative Analysis of DNA Methylation and Gene Expression Patterns in Tissues from Hepatocellular Carcinoma Patients. BIBM (2019)
Megan E. Barefoot, Rency S. Varghese, Yuan Zhou, Cristina Di Poto, Alessia Ferrarini, Habtom W. Ressom
Multi-omic Pathway and Network Analysis to Identify Biomarkers for Hepatocellular Carcinoma. EMBC (2019)
Zhenzhi Li, Yiming Zuo, Chaohui Xu, Rency S. Varghese, Habtom W. Ressom
INDEED: R package for network based differential expression analysis. BIBM (2018)
Rency S. Varghese, Yiming Zuo, Yi Zhao, Yong-Wei Zhang, Sandra A. Jablonski, Mariaelena Pierobon, Emanuel F. Petricoin, Habtom W. Ressom, Louis M. Weiner
Network-based analysis of reverse phase protein array data. BIBM (2016)
Habtom W. Ressom, Cristina Di Poto, Alessia Ferrarini, Yunli Hu, Mohammad R. Nezami Ranjbar, Ehwang Song, Rency S. Varghese, Minkun Wang, Shiyue Zhou, Rui Zhu, Yiming Zuo, Mahlet G. Tadesse, Yehia Mechref
Multi-omic approaches for characterization of hepatocellular carcinoma. EMBC (2016)
Rency S. Varghese, Bin Zhou, Habtom W. Ressom
Meta-analysis of LC-MS based metabolomic experiments. BIBM Workshops (2011)
Leepika Tuli, Tsung-Heng Tsai, Rency S. Varghese, Amrita K. Cheema, Habtom W. Ressom
Using a spike-in experiment to evaluate analysis of LC-MS data. BIBM Workshops (2010)
Habtom W. Ressom, Rency S. Varghese, Lenka Goldman, Christopher A. Loffredo, Mohamed Abdel-Hamid, Zuzana Kyselova, Yehia Mechref, Milos V. Novotny, Radoslav Goldman
Analysis of MALDI-TOF Spectrometry Data for Detection of Glycan Biomarkers. Pacific Symposium on Biocomputing (2008)
Habtom W. Ressom, Rency S. Varghese, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
Peak selection from MALDI-TOF mass spectra using ant colony optimization. Bioinform. 23 (5) (2007)
Habtom W. Ressom, Rency S. Varghese, Eduard Orvisky, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
Ant Colony Optimization for Biomarker Identification from MALDI-TOF Mass Spectra. EMBC (2006)
Habtom W. Ressom, Rency S. Varghese, Eduard Orvisky, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
Biomarker Identification and Rule Extraction from Mass Spectral Serum Profiles. CIBCB (2006)
Habtom W. Ressom, Padma Natarajan, Rency S. Varghese, Mohamad T. Musavi
Applications of fuzzy logic in genomics. Fuzzy Sets Syst. 152 (1) (2005)
Habtom W. Ressom, Rency S. Varghese, Daniel Saha, Eduard Orvisky, Lenka Goldman, Emanuel F. Petricoin, Thomas P. Conrads, Timothy D. Veenstra, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
Particle swarm optimization for analysis of mass spectral serum profiles. GECCO (2005)
Habtom W. Ressom, Rency S. Varghese, Mohamed Abdel-Hamid, Sohair Abdel-Latif Eissa, Daniel Saha, Lenka Goldman, Emanuel F. Petricoin, Thomas P. Conrads, Timothy D. Veenstra, Christopher A. Loffredo, Radoslav Goldman
Analysis of mass spectral serum profiles for biomarker selection. Bioinform. 21 (21) (2005)
Habtom W. Ressom, Rency S. Varghese, Eduard Orvisky, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
Analysis of MALDI-TOF Serum Profiles for Biomarker Selection and Sample Classification. CIBCB (2005)
Habtom W. Ressom, Dali Wang, Rency S. Varghese, Robert Reynolds
Fuzzy logic-based gene regulatory network. FUZZ-IEEE (2003)