Pinaki Sarder

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 30

Top Topics

Automated Detection

Diabetes Mellitus

Neural Network Training

Generative Model

Top Venues

Medical Imaging: Digital Pathology

Nat. Mach. Intell.

Publications

Myles Joshua Toledo Tan, Alfredo Bayu Satriya, Shaira Limson Kee, Michael Aaron G. Sy, Pinaki Sarder
The Triple Aim of a Semester-Long Course in Science, Technology, and Society. TALE (2023)
Shaira L. Kee, Michael Aaron G. Sy, Samuel P. Border, Nicholas J. Lucarelli, Akshita Gupta, Pinaki Sarder, Marvin C. Masalunga, Myles Joshua Toledo Tan
Predicting Papillary Renal Cell Carcinoma Prognosis Using Integrative Analysis of Histopathological Images and Genomic Data. IWBBIO (2) (2023)
Usman Muhammad, Md. Ziaul Hoque, Mourad Oussalah, Anja Keskinarkaus, Tapio Seppänen, Pinaki Sarder
SAM: Self-augmentation mechanism for COVID-19 detection using chest X-ray images. Knowl. Based Syst. 241 (2022)
Souradeep Chakraborty, Rajarsi Gupta, Ke Ma, Darshana Govind, Pinaki Sarder, Won-Tak Choi, Waqas Mahmud, Eric Yee, Felicia Allard, Beatrice Knudsen, Gregory J. Zelinsky, Joel H. Saltz, Dimitris Samaras
Predicting the Visual Attention of Pathologists Evaluating Whole Slide Images of Cancer. MOVI@MICCAI (2022)
Avinash Kammardi Shashiprakash, Brendon Lutnick, Brandon Ginley, Darshana Govind, Nicholas J. Lucarelli, Kuang-Yu Jen, Avi Z. Rosenberg, Anatoly Urisman, Vighnesh Walavalkar, Jonathan E. Zuckerman, Marco Delsante, Mei Lin Z. Bissonnette, John E. Tomaszewski, David Manthey, Pinaki Sarder
A distributed system improves inter-observer and AI concordance in annotating interstitial fibrosis and tubular atrophy. Medical Imaging: Digital Pathology (2021)
Kuang-Yu Jen, Leema Krishna Murali, Brendon Lutnick, Brandon Ginley, Darshana Govind, Hidetoshi Mori, Guofeng Gao, Pinaki Sarder
In silico multi-compartment detection based on multiplex immunohistochemical staining in renal pathology. Medical Imaging: Digital Pathology (2021)
Brendon Lutnick, Leema Krishna Murali, Brandon Ginley, Pinaki Sarder
Histo-fetch - On-the-fly processing of gigapixel whole slide images simplifies and speeds neural network training. CoRR (2021)
Darshana Govind, Briana A. Santo, Brandon Ginley, Rabi Yacoub, Avi Z. Rosenberg, Kuang-Yu Jen, Vighnesh Walavalkar, Gregory E. Wilding, Amber M. Worral, Imtiaz Mohammad, Pinaki Sarder
Automated detection and quantification of Wilms' Tumor 1-positive cells in murine diabetic kidney disease. Medical Imaging: Digital Pathology (2021)
Brendon Lutnick, Avinash Kammardi Shashiprakash, David Manthey, Pinaki Sarder
User friendly, cloud based, whole slide image segmentation. Medical Imaging: Digital Pathology (2021)
Darshana Govind, Kuang-Yu Jen, Pinaki Sarder
Deep learning-based automated hot-spot detection and tumor grading in human gastrointestinal neuroendocrine tumor. Medical Imaging: Digital Pathology (2020)
Kathryn E. Maraszek, Briana A. Santo, Rabi Yacoub, John E. Tomaszewski, Imtiaz Mohammad, Amber M. Worral, Pinaki Sarder
The presence and location of podocytes in glomeruli as affected by diabetes mellitus. Medical Imaging: Digital Pathology (2020)
Brendon Lutnick, Brandon Ginley, Kuang-Yu Jen, Wen Dong, Pinaki Sarder
Generative modeling for label-free glomerular modeling and classification. Medical Imaging: Digital Pathology (2020)
Leema Krishna Murali, Brendon Lutnick, Brandon Ginley, John E. Tomaszewski, Pinaki Sarder
Generative modeling for renal microanatomy. Medical Imaging: Digital Pathology (2020)
Briana A. Santo, Brahm H. Segal, John E. Tomaszewski, Imtiaz Mohammad, Amber M. Worral, Sanjay Jain, Michelle B. Visser, Pinaki Sarder
Neutrophil Extracellular Traps (NETs): an unexplored territory in renal pathobiology, a pilot computational study. Medical Imaging: Digital Pathology (2020)
Brandon Ginley, Kuang-Yu Jen, Avi Rosenberg, Giovanni Maria Rossi, Sanjay Jain, Pinaki Sarder
Fully automated classification of glomerular lesions in lupus nephritis. Medical Imaging: Digital Pathology (2020)
Brendon Lutnick, Wen Dong, Zohar Nussinov, Pinaki Sarder
Unsupervised Community Detection with a Potts Model Hamiltonian, an Efficient Algorithmic Solution, and Applications in Digital Pathology. CoRR (2020)
Brandon Ginley, Kuang-Yu Jen, Avi Rosenberg, Felicia Yen, Sanjay Jain, Agnes B. Fogo, Pinaki Sarder
Neural Network Segmentation of Interstitial Fibrosis, Tubular Atrophy, and Glomerulosclerosis in Renal Biopsies. CoRR (2020)
Samuel Border, Kuang-Yu Jen, Washington L. C. dos-Santos, John Tomaszewski, Pinaki Sarder
Probabilistic modelling of diabetic nephropathy progression. Medical Imaging: Digital Pathology (2020)
Siddhartha Dhiman, Itender Singh, Pinaki Sarder
Computational analysis of cerebrovascular structures imaged using two-photon microscopy. Medical Imaging: Digital Pathology (2019)
Brendon Lutnick, Brandon Ginley, Darshana Govind, Sean D. McGarry, Peter S. LaViolette, Rabi Yacoub, Sanjay Jain, John E. Tomaszewski, Kuang-Yu Jen, Pinaki Sarder
An integrated iterative annotation technique for easing neural network training in medical image analysis. Nat. Mach. Intell. 1 (2) (2019)
Aurijoy Majumdar, Kuang-Yu Jen, Sanjay Jain, John E. Tomaszewski, Pinaki Sarder
Examining structural patterns and causality in diabetic nephropathy using inter-glomerular distance and Bayesian graphical models. Medical Imaging: Digital Pathology (2019)
Brandon G. Ginley, John E. Tomaszewski, Kuang-Yu Jen, Agnes B. Fogo, Sanjay Jain, Pinaki Sarder
Computational analysis of the structural progression of human glomeruli in diabetic nephropathy. Medical Imaging: Digital Pathology (2018)
Brendon Lutnick, Rabi Yacoub, Kuang-Yu Jen, John E. Tomaszewski, Sanjay Jain, Pinaki Sarder
Deep variational auto-encoders for unsupervised glomerular classification. Medical Imaging: Digital Pathology (2018)
Brendon Lutnick, Brandon Ginley, Darshana Govind, Sean D. McGarry, Peter S. LaViolette, Rabi Yacoub, Sanjay Jain, John E. Tomaszewski, Kuang-Yu Jen, Pinaki Sarder
Iterative annotation to ease neural network training: Specialized machine learning in medical image analysis. CoRR (2018)
Olivier Simon, Rabi Yacoub, Sanjay Jain, John E. Tomaszewski, Pinaki Sarder
Examining structural changes in diabetic nephropathy using inter-nuclear distances in glomeruli: a comparison of variously automated methods. Medical Imaging: Digital Pathology (2018)
Darshana Govind, Brandon Ginley, Brendon Lutnick, John E. Tomaszewski, Pinaki Sarder
Glomerular detection and segmentation from multimodal microscopy images using a Butterworth band-pass filter. Medical Imaging: Digital Pathology (2018)
Brendon Lutnick, John E. Tomaszewski, Pinaki Sarder
Leveraging unsupervised training sets for multi-scale compartmentalization in renal pathology. Medical Imaging: Digital Pathology (2017)
Brandon Ginley, Tiffany Emmons, Prabhu Sasankan, Constantin Urban, Brahm H. Segal, Pinaki Sarder
Identification and characterization of neutrophil extracellular trap shapes in flow cytometry. Medical Imaging: Digital Pathology (2017)
Brandon Ginley, John E. Tomaszewski, Pinaki Sarder
Automatic computational labeling of glomerular textural boundaries. Medical Imaging: Digital Pathology (2017)
Pinaki Sarder, Brandon Ginley, John E. Tomaszewski
Automated renal histopathology: digital extraction and quantification of renal pathology. Medical Imaging: Digital Pathology (2016)
Dandan Hu, Pinaki Sarder, Peter Ronhovde, Sharon Bloch, Samuel Achilefu, Zohar Nussinov
Segmenting Intracellular Distribution Images Derived by Fluorescent Dyes Using a Potts Model Hamiltonian CoRR (2012)
Xiaoxiao Xu, Pinaki Sarder, Arye Nehorai
Statistical design of position-encoded microsphere arrays at low target concentrations. ACSCC (2011)
Pinaki Sarder, Arye Nehorai
Deconvolution methods for 3-D fluorescence microscopy images. IEEE Signal Process. Mag. 23 (3) (2006)