Peter M. A. van Ooijen

Publication Activity (10 Years)

Years Active: 1996-2024
Publications (10 Years): 49

Top Topics

Convolutional Neural Networks

Survival Prediction

Top Venues

J. Digit. Imaging

J. Medical Syst.

Publications

Alessia De Biase, Liv Ziegfeld, Nanna Maria Sijtsema, Roel Steenbakkers, Robin Wijsman, Lisanne van Dijk, Johannes A. Langendijk, Fokie Cnossen, Peter M. A. van Ooijen
Probability maps for deep learning-based head and neck tumor segmentation: Graphical User Interface design and test. Comput. Biol. Medicine 177 (2024)
Erfan Darzi, Yiqing Shen, Yangming Ou, Nanna Maria Sijtsema, Peter M. A. van Ooijen
Tackling heterogeneity in medical federated learning via aligning vision transformers. Artif. Intell. Medicine 155 (2024)
Jingxuan Wang, Nikos Sourlos, Marjolein Heuvelmans, Mathias Prokop, Rozemarijn Vliegenthart, Peter M. A. van Ooijen
Explainable machine learning model based on clinical factors for predicting the disappearance of indeterminate pulmonary nodules. Comput. Biol. Medicine 169 (2024)
Alessia De Biase, Baoqiang Ma, Jiapan Guo, Lisanne van Dijk, Johannes A. Langendijk, Stefan Both, Peter M. A. van Ooijen, Nanna Maria Sijtsema
Deep learning-based outcome prediction using PET/CT and automatically predicted probability maps of primary tumor in patients with oropharyngeal cancer. Comput. Methods Programs Biomed. 244 (2024)
Jingxiong Li, Sunyi Zheng, Zhongyi Shui, Shichuan Zhang, Linyi Yang, Yuxuan Sun, Yunlong Zhang, Honglin Li, Yuanxin Ye, Peter M. A. van Ooijen, Kang Li, Lin Yang
Masked Conditional Variational Autoencoders for Chromosome Straightening. IEEE Trans. Medical Imaging 43 (1) (2024)
Erfan Darzi, Florian Dubost, Nanna Maria Sijtsema, Peter M. A. van Ooijen
The Hidden Adversarial Vulnerabilities of Medical Federated Learning. CoRR (2023)
Jingxiong Li, Sunyi Zheng, Zhongyi Shui, Shichuan Zhang, Linyi Yang, Yuxuan Sun, Yunlong Zhang, Honglin Li, Yuanxin Ye, Peter M. A. van Ooijen, Kang Li, Lin Yang
Masked conditional variational autoencoders for chromosome straightening. CoRR (2023)
Erfan Darzi, Yiqing Shen, Nanna Maria Sijtsema, Peter M. A. van Ooijen
Tackling Heterogeneity in Medical Federated learning via Vision Transformers. CoRR (2023)
Dewinda Julianensi Rumala, Peter M. A. van Ooijen, Reza Fuad Rachmadi, Anggraini Dwi Sensusiati, I Ketut Eddy Purnama
Deep-Stacked Convolutional Neural Networks for Brain Abnormality Classification Based on MRI Images. J. Digit. Imaging 36 (4) (2023)
Erfan Darzi, Florian Dubost, Nanna Maria Sijtsema, Peter M. A. van Ooijen
Exploring adversarial attacks in federated learning for medical imaging. CoRR (2023)
Baoqiang Ma, Jiapan Guo, Lisanne van Dijk, Peter M. A. van Ooijen, Stefan Both, Nanna Maria Sijtsema
TransRP: Transformer-based PET/CT feature extraction incorporating clinical data for recurrence-free survival prediction in oropharyngeal cancer. MIDL (2023)
Wei Tang, Peter M. A. van Ooijen, Deborah A. Sival, Natasha M. Maurits
Classification of Movement Disorders Using Video Recordings of Gait with Attention-based Graph Convolutional Networks. BHI (2023)
Erfan Darzi, Nanna Maria Sijtsema, Peter M. A. van Ooijen
Fed-Safe: Securing Federated Learning in Healthcare Against Adversarial Attacks. CoRR (2023)
Lingyun Yu, Joost Ouwerling, Pjotr Svetachov, Frans h. j. van Hoesel, Peter M. A. van Ooijen, Jirí Kosinka
VeLight: A 3D virtual reality tool for CT-based anatomy teaching and training. J. Vis. 25 (2) (2022)
Alessia De Biase, Nanna Maria Sijtsema, Lisanne van Dijk, Johannes A. Langendijk, Peter M. A. van Ooijen
Slice-by-slice deep learning aided oropharyngeal cancer segmentation with adaptive thresholding for spatial uncertainty on FDG PET and CT images. CoRR (2022)
Allard W. Olthof, Peter M. A. van Ooijen, Ludo J. Cornelissen
The natural language processing of radiology requests and reports of chest imaging: Comparing five transformer models' multilabel classification and a proof-of-concept study. Health Informatics J. 28 (4) (2022)
Baoqiang Ma, Yan Li, Hung Chu, Wei Tang, Luis Ricardo De la O. Arévalo, Jiapan Guo, Peter M. A. van Ooijen, Stefan Both, Johannes A. Langendijk, Lisanne van Dijk, Nanna Maria Sijtsema
Deep Learning and Radiomics Based PET/CT Image Feature Extraction from Auto Segmented Tumor Volumes for Recurrence-Free Survival Prediction in Oropharyngeal Cancer Patients. HECKTOR@MICCAI (2022)
L. B. van den Oever, D. S. Spoor, A. P. G. Crijns, Rozemarijn Vliegenthart, Matthijs Oudkerk, Raymond N. J. Veldhuis, Geertruida H. de Bock, Peter M. A. van Ooijen
Automatic Cardiac Structure Contouring for Small Datasets with Cascaded Deep Learning Models. J. Medical Syst. 46 (5) (2022)
Wei Tang, Peter M. A. van Ooijen, Deborah A. Sival, Natasha M. Maurits
2D Gait Skeleton Data Normalization for Quantitative Assessment of Movement Disorders from Freehand Single Camera Video Recordings. Sensors 22 (11) (2022)
Peter M. A. van Ooijen, Erfan Darzidehkalani, Andre Dekker
AI Technical Considerations: Data Storage, Cloud usage and AI Pipeline. CoRR (2022)
L. B. van den Oever, W. A. van Veldhuizen, Ludo J. Cornelissen, D. S. Spoor, Tineke P. Willems, G. Kramer, T. Stigter, Mieneke Rook, A. P. G. Crijns, Matthijs Oudkerk, Raymond N. J. Veldhuis, Geertruida H. de Bock, Peter M. A. van Ooijen
Qualitative Evaluation of Common Quantitative Metrics for Clinical Acceptance of Automatic Segmentation: a Case Study on Heart Contouring from CT Images by Deep Learning Algorithms. J. Digit. Imaging 35 (2) (2022)
Hung Chu, Luis Ricardo De la O. Arévalo, Wei Tang, Baoqiang Ma, Yan Li, Alessia De Biase, Stefan Both, Johannes A. Langendijk, Peter M. A. van Ooijen, Nanna Maria Sijtsema, Lisanne van Dijk
Swin UNETR for Tumor and Lymph Node Segmentation Using 3D PET/CT Imaging: A Transfer Learning Approach. HECKTOR@MICCAI (2022)
Tri Arief Sardjono, Peter M. A. van Ooijen, I. Ketut Eddy Purnama, Berlian Al Kindhi, Ardian Yusuf Wicaksono, Eko M. Yuniarno, Gijbertus Jacob Verkerke, Mauridhi Hery Purnomo, Michael H. F. Wilkinson
Spring-Charged Particles Model to Improved Shape Recovery: An Application for X-Ray Spinal Segmentation. IEEE Access 10 (2022)
Yeshaswini Nagaraj, Hendrik Joost Wisselink, Mieneke Rook, Jiali Cai, Sunil Belur Nagaraj, Grigory Sidorenkov, Raymond N. J. Veldhuis, Matthijs Oudkerk, Rozemarijn Vliegenthart, Peter M. A. van Ooijen
AI-Driven Model for Automatic Emphysema Detection in Low-Dose Computed Tomography Using Disease-Specific Augmentation. J. Digit. Imaging 35 (3) (2022)
Alessia De Biase, Wei Tang, Nikos Sourlos, Baoqiang Ma, Jiapan Guo, Nanna Maria Sijtsema, Peter M. A. van Ooijen
Skip-SCSE Multi-scale Attention and Co-learning Method for Oropharyngeal Tumor Segmentation on Multi-modal PET-CT Images. HECKTOR@MICCAI (2021)
Allard W. Olthof, P. Shouche, E. M. Fennema, F. F. A. IJpma, R. H. C. Koolstra, V. M. A. Stirler, Peter M. A. van Ooijen, Ludo J. Cornelissen
Machine learning based natural language processing of radiology reports in orthopaedic trauma. Comput. Methods Programs Biomed. 208 (2021)
Allard W. Olthof, Peter M. A. van Ooijen, Ludo J. Cornelissen
Deep Learning-Based Natural Language Processing in Radiology: The Impact of Report Complexity, Disease Prevalence, Dataset Size, and Algorithm Type on Model Performance. J. Medical Syst. 45 (10) (2021)
Baoqiang Ma, Jiapan Guo, Alessia De Biase, Nikos Sourlos, Wei Tang, Peter M. A. van Ooijen, Stefan Both, Nanna Maria Sijtsema
Self-supervised Multi-modality Image Feature Extraction for the Progression Free Survival Prediction in Head and Neck Cancer. HECKTOR@MICCAI (2021)
Peter A. J. Pijpker, Tim S. Oosterhuis, Max J. H. Witjes, Chris Faber, Peter M. A. van Ooijen, Jirí Kosinka, Jos M. A. Kuijlen, Rob J. M. Groen, Joep Kraeima
A semi-automatic seed point-based method for separation of individual vertebrae in 3D surface meshes: a proof of principle study. Int. J. Comput. Assist. Radiol. Surg. 16 (9) (2021)
Bingjiang Qiu, Jiapan Guo, Joep Kraeima, Haye H. Glas, Ronald J. H. Borra, Max J. H. Witjes, Peter M. A. van Ooijen
Recurrent convolutional neural networks for mandible segmentation from computed tomography. CoRR (2020)
Jordy K. van Zandwijk, Volkan Tuncay, Rozemarijn Vliegenthart, Gert Jan Pelgrim, Cornelis H. Slump, Matthijs Oudkerk, Peter M. A. van Ooijen
Assessment of Dynamic Change of Coronary Artery Geometry and Its Relationship to Coronary Artery Disease, Based on Coronary CT Angiography. J. Digit. Imaging 33 (2) (2020)
Sunyi Zheng, Jiapan Guo, Xiaonan Cui, Raymond N. J. Veldhuis, Matthijs Oudkerk, Peter M. A. van Ooijen
Automatic Pulmonary Nodule Detection in CT Scans Using Convolutional Neural Networks Based on Maximum Intensity Projection. IEEE Trans. Medical Imaging 39 (3) (2020)
I. Made Gede Sunarya, Eko Mulyanto Yuniarno, Tri Arief Sardjono, Ismoyo Sunu, Peter M. A. van Ooijen, I. Ketut Eddy Purnama
3D reconstruction of carotid artery in B-mode ultrasound image using modified template matching based on ellipse feature. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 8 (3) (2020)
Volkan Tuncay, Jan Zijlstra, Matthijs Oudkerk, Peter M. A. van Ooijen
Design, Implementation, and Validation of a Pulsatile Heart Phantom Pump. J. Digit. Imaging 33 (5) (2020)
Sunyi Zheng, Ludo J. Cornelissen, Xiaonan Cui, Xueping Jing, Raymond N. J. Veldhuis, Matthijs Oudkerk, Peter M. A. van Ooijen
Efficient convolutional neural networks for multi-planar lung nodule detection: improvement on small nodule identification. CoRR (2020)
Sunyi Zheng, Xiaonan Cui, Marleen Vonder, Raymond N. J. Veldhuis, Zhaoxiang Ye, Rozemarijn Vliegenthart, Matthijs Oudkerk, Peter M. A. van Ooijen
Deep learning-based pulmonary nodule detection: Effect of slab thickness in maximum intensity projections at the nodule candidate detection stage. Comput. Methods Programs Biomed. 196 (2020)
Allard W. Olthof, Anne L. M. Leusveld, Jan Cees de Groot, Petra M. C. Callenbach, Peter M. A. van Ooijen
Contextual Structured Reporting in Radiology: Implementation and Long-Term Evaluation in Improving the Communication of Critical Findings. J. Medical Syst. 44 (9) (2020)
Sunyi Zheng, Jiapan Guo, Xiaonan Cui, Raymond N. J. Veldhuis, Matthijs Oudkerk, Peter M. A. van Ooijen
Automatic Pulmonary Nodule Detection in CT Scans Using Convolutional Neural Networks Based on Maximum Intensity Projection. CoRR (2019)
Lorenzo Amabili, Jirí Kosinka, Maarten A. J. van Meersbergen, Peter M. A. van Ooijen, Jos B. T. M. Roerdink, Pjotr Svetachov, Lingyun Yu
Improving Provenance Data Interaction for Visual Storytelling in Medical Imaging Data Exploration. EuroVis (Short Papers) (2018)
Bingjiang Qiu, Jiapan Guo, Joep Kraeima, Ronald J. H. Borra, Max J. H. Witjes, Peter M. A. van Ooijen
3D segmentation of mandible from multisectional CT scans by convolutional neural networks. CoRR (2018)
Allard W. Olthof, Peter M. A. van Ooijen
Implementation and Validation of PACS Integrated Peer Review for Discrepancy Recording of Radiology Reporting. J. Medical Syst. 40 (9) (2016)
Wiard Jorritsma, Fokie Cnossen, Rudi A. Dierckx, Matthijs Oudkerk, Peter M. A. van Ooijen
Pattern mining of user interaction logs for a post-deployment usability evaluation of a radiology PACS client. Int. J. Medical Informatics 85 (1) (2016)
Erik R. Ranschaert, Peter M. A. van Ooijen, Geraldine B. McGinty, Paul M. Parizel
Radiologists' Usage of Social Media: Results of the RANSOM Survey. J. Digit. Imaging 29 (4) (2016)
K. Y. E. Aryanto, G. van Kernebeek, B. Berendsen, Matthijs Oudkerk, Peter M. A. van Ooijen
Image De-Identification Methods for Clinical Research in the XDS Environment. J. Medical Syst. 40 (4) (2016)
Wiard Jorritsma, Fokie Cnossen, Rudi A. Dierckx, Matthijs Oudkerk, Peter M. A. van Ooijen
Post-deployment usability evaluation of a radiology workstation. Int. J. Medical Informatics 85 (1) (2016)
K. Y. E. Aryanto, A. Broekema, R. G. A. Langenhuysen, Matthijs Oudkerk, Peter M. A. van Ooijen
A Web-Based Institutional DICOM Distribution System with the Integration of the Clinical Trial Processor (CTP). J. Medical Syst. 39 (5) (2015)
Wiard Jorritsma, Jonatan T. Prins, Peter M. A. van Ooijen
Comparing Four Touch-Based Interaction Techniques for an Image-Based Audience Response System. Int. J. Hum. Comput. Interact. 31 (6) (2015)
Peter M. A. van Ooijen, Kadek Yota E. Aryanto, André Broekema, Steven C. Horii
DICOM data migration for PACS transition: procedure and pitfalls. Int. J. Comput. Assist. Radiol. Surg. 10 (7) (2015)
Wiard Jorritsma, Fokie Cnossen, Peter M. A. van Ooijen
Adaptive support for user interface customization: a study in radiology. Int. J. Hum. Comput. Stud. 77 (2015)
Wiard Jorritsma, Fokie Cnossen, Peter M. A. van Ooijen
Merits of usability testing for PACS selection. Int. J. Medical Informatics 83 (1) (2014)
Peter M. A. van Ooijen, A. Broekema, Matthijs Oudkerk
Design and implementation of I2Vote - An interactive image-based voting system using windows mobile devices. Int. J. Medical Informatics 80 (8) (2011)
Rogier van de Wetering, Ronald Batenburg, Matthijs Oudkerk, Peter M. A. van Ooijen, Sjaak Brinkkemper, Wim Scheper
A Situational Alignment Framework for PACS. J. Digit. Imaging 24 (6) (2011)
Peter M. A. van Ooijen, A. R. Viddeleer, Floris Meijer, Matthijs Oudkerk
Accessibility of Data Backup on CD-R after 8 to 11 years. J. Digit. Imaging 23 (1) (2010)
Peter M. A. van Ooijen, A. Broekema, Matthijs Oudkerk
Use of a Thin-Section Archive and Enterprise 3-Dimensional Software for Long-Term Storage of Thin-Slice CT Data Sets - A Reviewers' Response. J. Digit. Imaging 21 (2) (2008)
I. Ketut E. Purnama, Michael H. F. Wilkinson, Albert G. Veldhuizen, Peter M. A. van Ooijen, Jaap Lubbers, Tri Arief Sardjono, Gijbertus Jacob Verkerke
Branches filtering approach for max-tree. VISAPP (1) (2007)
W. Kristanto, Peter M. A. van Ooijen, Bertram The, H. Duifhuis, Tati Rajab Mengko, Matthijs Oudkerk
Design and Implementation of Gradient Vector Flow Snake to Detect a Reference Object in Pelvic X-Rays for Preoperative Total Hip Arthroplasty Planning Application. J. Digit. Imaging 20 (4) (2007)
Peter M. A. van Ooijen, R. Roosjen, M. J. de Blecourt, R. van Dam, A. Broekema, Matthijs Oudkerk
Evaluation of the Use of CD-ROM Upload into the PACS or Institutional Web Server. J. Digit. Imaging 19 (S-1) (2006)
Peter M. A. van Ooijen, Allya P. Koesoema, Matthijs Oudkerk
User Questionnaire to Evaluate the Radiological Workspace. J. Digit. Imaging 19 (S-1) (2006)
Peter M. A. van Ooijen, J. Guignot, G. Mevel, Matthijs Oudkerk
Incorporating Out-Patient Data From CD-R Into the Local PACS Using DICOM Worklist Features. J. Digit. Imaging 18 (3) (2005)
Peter M. A. van Ooijen, R. Witkamp, Matthijs Oudkerk
Multi-Detector CT and 3D imaging in a multi-vendor PACS environment. CARS (2003)
Roy Irwan, Peter M. A. van Ooijen, W. G. J. Tukker, Matthijs Oudkerk
The influence of beam-pitch, reconstruction slice-thickness, and kernels on 3D-visualisation of 16-MSCT data. CARS (2003)
Peter M. A. van Ooijen, Arie Munne, Marco T. C. Hoedt, Matthijs Oudkerk
Three-dimensional volume rendered CT for preparation and evaluation of endovascular treatment of popliteal aneurysms. CARS (2001)
Peter M. A. van Ooijen, A. H. H. Bongaertz, Matthijs Oudkerk
Everything On-Line (EOL) PACS: A new concept in PACS. EuroPACS (2000)
Karel J. Zuiderveld, Peter M. A. van Ooijen, John W. C. Chin-A-Woeng, Pieter C. Buijs, Marco Olree, Frits H. Post
Clinical Evaluation of Interactive Volume Visualization. IEEE Visualization (1996)