Peter A. J. Hilbers

Publication Activity (10 Years)

Years Active: 1987-2021
Publications (10 Years): 6

Top Topics

Biochemical Networks

Visual Environment

Computational Model

Top Venues

PLoS Comput. Biol.

BMC Syst. Biol.

Publications

Óscar Lapuente-Santana, Maisa van Genderen, Peter A. J. Hilbers, Francesca Finotello, Federica Eduati
Interpretable systems biomarkers predict response to immune-checkpoint inhibitors. Patterns 2 (8) (2021)
Andrea Cabbia, Peter A. J. Hilbers, Natal A. W. van Riel
A Distance-Based Framework for the Characterization of Metabolic Heterogeneity in Large Sets of Genome-Scale Metabolic Models. Patterns 1 (6) (2020)
Andrea Cabbia, Peter A. J. Hilbers, Natal A. W. van Riel
A Distance-Based Framework for the Characterization of Metabolic Heterogeneity in Large Sets of Genome-Scale Metabolic Models. Patterns 1 (9) (2020)
Yvonne J. W. Rozendaal, Yanan Wang, Peter A. J. Hilbers, Natal A. W. van Riel
Computational modelling of energy balance in individuals with Metabolic Syndrome. BMC Syst. Biol. 13 (1) (2019)
Daniela Modena, Davide Bassano, Aaldert Elevelt, Marco Baragona, Peter A. J. Hilbers, Michel A. Westenberg
HIFUpm: a Visual Environment to Plan and Monitor High Intensity Focused Ultrasound Treatments. VCBM (2019)
Yvonne J. W. Rozendaal, Yanan Wang, Yared Paalvast, Lauren L. Tambyrajah, Zhuang Li, Ko Willems van Dijk, Patrick C. N. Rensen, Jan A. Kuivenhoven, Albert K. Groen, Peter A. J. Hilbers, Natal A. W. van Riel
In vivo and in silico dynamics of the development of Metabolic Syndrome. PLoS Comput. Biol. 14 (6) (2018)
Dragan Bosnacki, Hubertus M. M. ten Eikelder, Marieke Maanders, Peter A. J. Hilbers
Robustness of the Gray Code Arrangements of the Genetic Code in Mitochondria. ICT Innovations (2014)
Joep Vanlier, Christian A. Tiemann, Peter A. J. Hilbers, Natal A. W. van Riel
Optimal experiment design for model selection in biochemical networks. BMC Syst. Biol. 8 (2014)
Fianne L. P. Sips, Christian A. Tiemann, Maaike H. Oosterveer, Albert K. Groen, Peter A. J. Hilbers, Natal A. W. van Riel
A Computational Model for the Analysis of Lipoprotein Distributions in the Mouse: Translating FPLC Profiles to Lipoprotein Metabolism. PLoS Comput. Biol. 10 (5) (2014)
Christian A. Tiemann, Joep Vanlier, Maaike H. Oosterveer, Albert K. Groen, Peter A. J. Hilbers, Natal A. W. van Riel
Parameter Trajectory Analysis to Identify Treatment Effects of Pharmacological Interventions. PLoS Comput. Biol. 9 (8) (2013)
Willem P. A. Ligtenberg, Dragan Bosnacki, Peter A. J. Hilbers
Reconn: a Cytoscape Plug-in for Exploring and Visualizing Reactome. J. Bioinform. Comput. Biol. 11 (4) (2013)
Joep Vanlier, Christian A. Tiemann, Peter A. J. Hilbers, Natal A. W. van Riel
An integrated strategy for prediction uncertainty analysis. Bioinform. 28 (8) (2012)
Joep Vanlier, Christian A. Tiemann, Peter A. J. Hilbers, Natal A. W. van Riel
A Bayesian approach to targeted experiment design. Bioinform. 28 (8) (2012)
Dragan Bonaki, Maximilian R. Odenbrett, Anton Wijs, Willem P. A. Ligtenberg, Peter A. J. Hilbers
Efficient reconstruction of biological networks via transitive reduction on general purpose graphics processors. BMC Bioinform. 13 (2012)
Luc Roumen, Bram Van Hoof, Koen Pieterse, Peter A. J. Hilbers, Erica M. G. Custers, Ralf Plate, Marcel de Gooyer, Ilona P. E. Beugels, Judith M. A. Emmen, Dirk Leysen, Jos F. M. Smits, Harry C. J. Ottenheijm, J. J. Rob Hermans
Application of a ligand-based theoretical approach to derive conversion paths and ligand conformations in CYP11B2-mediated aldosterone formation. J. Comput. Chem. 32 (11) (2011)
Christian A. Tiemann, Joep Vanlier, Peter A. J. Hilbers, Natal A. W. van Riel
Parameter adaptations during phenotype transitions in progressive diseases. BMC Syst. Biol. 5 (2011)
Marvin N. Steijaert, J. H. K. Van Den Brink, Anthony M. L. Liekens, Peter A. J. Hilbers, Huub M. M. ten Eikelder
Computing the Stochastic Dynamics of Phosphorylation Networks. J. Comput. Biol. 17 (2) (2010)
H. J. Buisman, Huub M. M. ten Eikelder, Peter A. J. Hilbers, Anthony M. L. Liekens
Computing Algebraic Functions with Biochemical Reaction Networks. Artif. Life 15 (1) (2009)
Mark van Heeswijk, Yoan Miche, Tiina Lindh-Knuutila, Peter A. J. Hilbers, Timo Honkela, Erkki Oja, Amaury Lendasse
Adaptive Ensemble Models of Extreme Learning Machines for Time Series Prediction. ICANN (2) (2009)
Willem P. A. Ligtenberg, Dragan Bosnacki, Peter A. J. Hilbers
Mining Maximal Frequent Subgraphs in KEGG Reaction Networks. DEXA Workshops (2009)
Inge van den Berg, Dragan Bosnacki, Peter A. J. Hilbers
Large Scale Analysis of Small Repeats via Mining of the Human Genome. DEXA Workshops (2009)
Anthony M. L. Liekens, Huub M. M. ten Eikelder, Marvin N. Steijaert, Peter A. J. Hilbers
Simulated Evolution of Mass Conserving Reaction Networks. ALIFE (2008)
Marvin N. Steijaert, Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
Multiple Functionalities of Biochemical Reaction Networks. ALIFE (2008)
Luc Roumen, Marijn P. A. Sanders, Koen Pieterse, Peter A. J. Hilbers, Ralf Plate, Erica M. G. Custers, Marcel de Gooyer, Jos F. M. Smits, Ilona P. E. Beugels, Judith M. A. Emmen, Harry C. J. Ottenheijm, Dirk Leysen, J. J. Rob Hermans
Construction of 3D models of the CYP11B family as a tool to predict ligand binding characteristics. J. Comput. Aided Mol. Des. 21 (8) (2007)
Huub M. M. ten Eikelder, Sjoerd P. M. Crijns, Marvin N. Steijaert, Anthony M. L. Liekens, Peter A. J. Hilbers
Computing with Feedforward Networks of Artificial Biochemical Neurons. IWNC (2007)
Silvia V. Nedea, Arjan J. H. Frijns, Anton A. van Steenhoven, A. P. J. Jansen, A. J. Markvoort, Peter A. J. Hilbers
Density distribution for a dense hard-sphere gas in micro/nano-channels: Analytical and simulation results. J. Comput. Phys. 219 (2) (2006)
Nico H. L. Kuijpers, Rikkert H. Keldermann, Huub M. M. ten Eikelder, Theo Arts, Peter A. J. Hilbers
The Role of the Hyperpolarization-Activated Inward Current $I\rm _ f$ in Arrhythmogenesis: A Computer Model Study. IEEE Trans. Biomed. Eng. 53 (8) (2006)
Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
Predicting Genetic Drift in 2×2 Games. GECCO (1) (2004)
Arjan J. H. Frijns, Silvia V. Nedea, A. J. Markvoort, Anton A. van Steenhoven, Peter A. J. Hilbers
Molecular Dynamics and Monte Carlo Simulations for Heat Transfer in Micro and Nano-channels. International Conference on Computational Science (2004)
Dragan Bosnacki, Huub M. M. ten Eikelder, Peter A. J. Hilbers
Genetic Code as a Gray Code Revisited. METMBS (2003)
Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
Finite population models of dynamic optimization with stochastically alternating fitness functions. IEEE Congress on Evolutionary Computation (2003)
Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
Finite Population Models of Co-evolution and Their Application to Haploidy versus Diploidy. GECCO (2003)
Silvia V. Nedea, Johan J. Lukkien, Peter A. J. Hilbers, A. P. J. Jansen
Methods for Parallel Simulations of Surface Reactions. IPDPS (2003)
Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
Modeling and Simulating Diploid Simple Genetic Algorithms. FOGA (2002)
A. J. Markvoort, R. Pino, Peter A. J. Hilbers
Interpolating Wavelets in Kohn-Sham Electronic Structure Calculations. International Conference on Computational Science (1) (2001)
John Segers, Johan J. Lukkien, Peter A. J. Hilbers
Parallel Monte Carlo Simulation of Chemical Surface Reactions: A Case Study. HPCN Europe (1996)
Peter A. J. Hilbers, Johan J. Lukkien
Deadlock-Free Message Routing in Multicomputer Networks. Distributed Comput. 3 (4) (1989)
Peter A. J. Hilbers, Marion R. J. Koopman, Jan L. A. van de Snepscheut
The Twisted Cube. PARLE (1) (1987)