Olivier Elemento

Publication Activity (10 Years)

Years Active: 2002-2022
Publications (10 Years): 14

Top Topics

Physico Chemical

Biomedical Engineering

Top Venues

Briefings Bioinform.

PLoS Comput. Biol.

Publications

Matthew Brendel, Chang Su, Zilong Bai, Hao Zhang, Olivier Elemento, Fei Wang
Application of Deep Learning on Single-cell RNA Sequencing Data Analysis: A Review. Genom. Proteom. Bioinform. 20 (5) (2022)
Matthew Brendel, Chang Su, Zilong Bai, Hao Zhang, Olivier Elemento, Fei Wang
Application of Deep Learning on Single-Cell RNA-sequencing Data Analysis: A Review. CoRR (2022)
Mengying Sun, Fei Wang, Olivier Elemento, Jiayu Zhou
Structure-Based Drug-Drug Interaction Detection via Expressive Graph Convolutional Networks and Deep Sets (Student Abstract). AAAI (2020)
Mengying Sun, Sendong Zhao, Coryandar Gilvary, Olivier Elemento, Jiayu Zhou, Fei Wang
Graph convolutional networks for computational drug development and discovery. Briefings Bioinform. 21 (3) (2020)
Nicola Casiraghi, Francesco Orlando, Yari Ciani, Jenny Xiang, Andrea Sboner, Olivier Elemento, Gerhardt Attard, Himisha Beltran, Francesca Demichelis, Alessandro Romanel
ABEMUS: platform-specific and data-informed detection of somatic SNVs in cfDNA. Bioinform. 36 (9) (2020)
Coryandar Gilvary, Jamal Elkhader, Neel Madhukar, Claire Henchcliffe, Marcus D. Goncalves, Olivier Elemento
A machine learning and network framework to discover new indications for small molecules. PLoS Comput. Biol. 16 (8) (2020)
Pegah Khosravi, Ehsan Kazemi, Qiansheng Zhan, Jonas Malmsten, Marco Toschi, Pantelis Zisimopoulos, Alexandros Sigaras, Stuart Lavery, Lee A. D. Cooper, Cristina Hickman, Marcos Meseguer, Zev Rosenwaks, Olivier Elemento, Nikica Zaninovic, Iman Hajirasouliha
Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization. npj Digit. Medicine 2 (2019)
Yongjun Zhu, Olivier Elemento, Jyotishman Pathak, Fei Wang
Drug knowledge bases and their applications in biomedical informatics research. Briefings Bioinform. 20 (4) (2019)
Kevin Michael Boehm, Bhavneet Bhinder, Vijay Joseph Raja, Noah Dephoure, Olivier Elemento
Predicting peptide presentation by major histocompatibility complex class I: an improved machine learning approach to the immunopeptidome. BMC Bioinform. 20 (1) (2019)
Mahboubeh Jannesari, Mehdi Habibzadeh, HamidReza Aboulkheyr, Pegah Khosravi, Olivier Elemento, Mehdi Totonchi, Iman Hajirasouliha
Breast Cancer Histopathological Image Classification: A Deep Learning Approach. BIBM (2018)
Alessandro Romanel, Tuo Zhang, Olivier Elemento, Francesca Demichelis
EthSEQ: ethnicity annotation from whole exome sequencing data. Bioinform. 33 (15) (2017)
Linda Huang, Helen Fernandes, Hamid Zia, Peyman Tavassoli, Hanna Rennert, David Pisapia, Marcin Imielinski, Andrea Sboner, Mark A. Rubin, Michael Kluk, Olivier Elemento
The cancer precision medicine knowledge base for structured clinical-grade mutations and interpretations. J. Am. Medical Informatics Assoc. 24 (3) (2017)
Kaitlyn M. Gayvert, Omar Aly, James Platt, Marcus W. Bosenberg, David F. Stern, Olivier Elemento
A Computational Approach for Identifying Synergistic Drug Combinations. PLoS Comput. Biol. 13 (1) (2017)
Andrea Sboner, Olivier Elemento
A primer on precision medicine informatics. Briefings Bioinform. 17 (1) (2016)
Eugenia G. Giannopoulou, Olivier Elemento
An integrated ChIP-seq analysis platform with customizable workflows. BMC Bioinform. 12 (2011)
Isabelle da Piedade, Man-Hung Eric Tang, Olivier Elemento
DISPARE: DIScriminative PAttern REfinement for Position Weight Matrices. BMC Bioinform. 10 (2009)
Olivier Elemento, Olivier Gascuel
An exact and polynomial distance-based algorithm to reconstruct single copy tandem duplication trees. J. Discrete Algorithms 3 (2-4) (2005)
Chang S. Chan, Olivier Elemento, Saeed Tavazoie
Revealing Posttranscriptional Regulatory Elements Through Network-Level Conservation. PLoS Comput. Biol. 1 (7) (2005)
Olivier Elemento, Olivier Gascuel
An Exact and Polynomial Distance-Based Algorithm to Reconstruct Single Copy Tandem Duplication Trees. CPM (2003)
Olivier Elemento, Olivier Gascuel
An efficient and accurate distance based algorithm to reconstruct tandem duplication trees. ECCB (2002)