Nicole E. Wheeler

Publication Activity (10 Years)

Years Active: 2014-2023
Publications (10 Years): 4

Top Topics

Genotype Phenotype

Data Distribution

Computational Methods

Top Venues

PLoS Comput. Biol.

Publications

Leonid Chindelevitch, Maarten van Dongen, Heather Graz, Antonio Pedrotta, Anita Suresh, Swapna Uplekar, Elita Jauneikaite, Nicole E. Wheeler
Ten simple rules for the sharing of bacterial genotype - Phenotype data on antimicrobial resistance. PLoS Comput. Biol. 19 (6) (2023)
Leonid Chindelevitch, Elita Jauneikaite, Nicole E. Wheeler, Kasim Allel, Bede Yaw Ansiri-Asafoakaa, Wireko A. Awuah, Denis C. Bauer, Stephan Beisken, Kara Fan, Gary Grant, Michael Graz, Yara Khalaf, Veranja Liyanapathirana, Carlos Montefusco-Pereira, Lawrence Mugisha, Atharv Naik, Sylvia Nanono, Anthony Nguyen, Timothy Rawson, Kessendri Reddy, Juliana M. Ruzante, Anneke Schmider, Roman Stocker, Leonhardt Unruh, Daniel Waruingi, Heather Graz, Maarten van Dongen
Applying data technologies to combat AMR: current status, challenges, and opportunities on the way forward. CoRR (2022)
Allison L. Hicks, Nicole E. Wheeler, Leonor Sánchez-Busó, Jennifer L. Rakeman, Simon R. Harris, Yonatan H. Grad
Evaluation of parameters affecting performance and reliability of machine learning-based antibiotic susceptibility testing from whole genome sequencing data. PLoS Comput. Biol. 15 (9) (2019)
Nicole E. Wheeler, Lars Barquist, Robert A. Kingsley, Paul P. Gardner
A profile-based method for identifying functional divergence of orthologous genes in bacterial genomes. Bioinform. 32 (23) (2016)
Stinus Lindgreen, Sinan Ugur Umu, Alicia Sook-Wei Lai, Hisham Eldai, Wenting Liu, Stephanie McGimpsey, Nicole E. Wheeler, Patrick J. Biggs, Nick R. Thomson, Lars Barquist, Anthony M. Poole, Paul P. Gardner
Robust Identification of Noncoding RNA from Transcriptomes Requires Phylogenetically-Informed Sampling. PLoS Comput. Biol. 10 (10) (2014)