Martin D. Muggli

Publication Activity (10 Years)

Years Active: 2014-2021
Publications (10 Years): 8

Top Topics

Graph Structures

Graph Theoretical

Historical Data

Top Venues

Algorithms Mol. Biol.

Publications

Bahar Alipanahi, Martin D. Muggli, Musa Jundi, Noelle R. Noyes, Christina Boucher
Metagenome SNP calling via read-colored de Bruijn graphs. Bioinform. 36 (22-23) (2021)
Leena Salmela, Kingshuk Mukherjee, Simon J. Puglisi, Martin D. Muggli, Christina Boucher
Fast and accurate correction of optical mapping data via spaced seeds. Bioinform. 36 (9) (2020)
Leena Salmela, Kingshuk Mukherjee, Simon J. Puglisi, Martin D. Muggli, Christina Boucher
Fast and accurate correction of optical mapping data via spaced seeds. Bioinform. 36 (3) (2020)
Martin D. Muggli, Simon J. Puglisi, Christina Boucher
Kohdista: an efficient method to index and query possible Rmap alignments. Algorithms Mol. Biol. 14 (1) (2019)
Martin D. Muggli, Bahar Alipanahi, Christina Boucher
Building large updatable colored de Bruijn graphs via merging. Bioinform. 35 (14) (2019)
Martin D. Muggli, Simon J. Puglisi, Christina Boucher
A Succinct Solution to Rmap Alignment. WABI (2018)
Bahar Alipanahi, Leena Salmela, Simon J. Puglisi, Martin D. Muggli, Christina Boucher
Disentangled Long-Read De Bruijn Graphs via Optical Maps. WABI (2017)
Martin D. Muggli, Alexander Bowe, Noelle R. Noyes, Paul S. Morley, Keith E. Belk, Robert Raymond, Travis Gagie, Simon J. Puglisi, Christina Boucher
Succinct colored de Bruijn graphs. Bioinform. 33 (20) (2017)
Martin D. Muggli, Simon J. Puglisi, Roy Ronen, Christina Boucher
Misassembly detection using paired-end sequence reads and optical mapping data. Bioinform. 31 (12) (2015)
Martin D. Muggli, Simon J. Puglisi, Christina Boucher
Efficient Indexed Alignment of Contigs to Optical Maps. WABI (2014)
Martin D. Muggli, Simon J. Puglisi, Roy Ronen, Christina Boucher
Misassembly Detection using Paired-End Sequence Reads and Optical Mapping Data. CoRR (2014)