Marcelo M. Brigido

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 8

Top Topics

Graph Databases

Intensity Profile

Multiple Alignment

Top Venues

J. Bioinform. Comput. Biol.

Publications

Pedro H. A. Barros, Waldeyr M. C. Silva, Marcelo M. Brigido
transcAnalysis: A Snakemake Pipeline for Differential Expression and Post-transcriptional Modification Analysis. BSB (2023)
Waldeyr Mendes Cordeiro da Silva, Daniela P. de Andrade, Jakob L. Andersen, Maria Emília Telles Walter, Marcelo M. Brigido, Peter F. Stadler, Christoph Flamm
Computational Simulations for Cyclizations Catalyzed by Plant Monoterpene Synthases. BSB (2020)
Manuela M. do Almo, Isabel G. Sousa, Waldeyr Mendes Cordeiro da Silva, Thomas Gatter, Peter F. Stadler, Steve Hoffmann, Andrea Queiroz Maranhão, Marcelo M. Brigido
Anti-CD3 Stimulated T Cell Transcriptome Reveals Novel ncRNAs and Correlates with a Suppressive Profile. BSB (2020)
Waldeyr Mendes Cordeiro da Silva, Polyane Wercelens, Maria Emília M. T. Walter, Maristela Holanda, Marcelo M. Brigido
Graph Databases in Molecular Biology. BSB (2018)
Bruno C. Kümmel, André C. P. L. F. de Carvalho, Marcelo M. Brigido, Célia Ghedini Ralha, Maria Emília M. T. Walter
S^2FS : Single Score Feature Selection Applied to the Problem of Distinguishing Long Non-coding RNAs from Protein Coding Transcripts. BSB (2018)
Gabriella Esteves, Waldeyr Mendes Cordeiro da Silva, Maria Emília Telles Walter, Marcelo M. Brigido, Fernanda Lima
Human-Computer Interaction Communicability Evaluation Method Applied to Bioinformatics. WorldCIST (2) (2018)
Guilherme P. Telles, Graziela S. Araújo, Maria Emília Telles Walter, Marcelo M. Brigido, Nalvo F. Almeida
Live neighbor-joining. BMC Bioinform. 19 (1) (2018)
Waldeyr Mendes Cordeiro da Silva, Danilo Vilar, Daniel S. Souza, Maria Emília Telles Walter, Marcelo M. Brigido, Maristela Holanda
2Path: A terpenoid metabolic network modeled as graph database. BIBM (2016)
Wosley Arruda, Daniel S. Souza, Célia Ghedini Ralha, Maria Emília M. T. Walter, Tainá Raiol, Marcelo M. Brigido, Peter F. Stadler
Knowledge-based reasoning to annotate noncoding RNA using multi-agent system. J. Bioinform. Comput. Biol. 13 (6) (2015)
Hugo W. Schneider, Sebastian Bartschat, Gero Doose, Lucas Maciel, Erick Pizani, Marcelo Bassani, Fernando Araripe Torres, Sebastian Will, Tainá Raiol, Marcelo M. Brigido, Maria Emília Telles Walter, Peter F. Stadler
Genome-Wide Identification of Non-coding RNAs in Komagatella pastoris str. GS115. BSB (2014)
Wosley Arruda, Célia Ghedini Ralha, Tainá Raiol, Marcelo M. Brigido, Maria Emília M. T. Walter, Peter F. Stadler
ncRNA-Agents: A Multiagent System for Non-coding RNA Annotation. BSB (2013)
Halian Vilela, Tainá Raiol, Andrea Queiroz Maranhão, Maria Emília Telles Walter, Marcelo M. Brigido
A Bioconductor Based Workflow for Z-DNA Region Detection and Biological Inference. BSB (2012)
Felipe Lessa, Daniele Martins Neto, Kátia Guimarães, Marcelo M. Brigido, Maria Emília Telles Walter
Regene: Automatic Construction of a Multiple Component Dirichlet Mixture Priors Covariance Model to Identify Non-coding RNA. ISBRA (2011)
Célia Ghedini Ralha, Hugo W. Schneider, Maria Emília M. T. Walter, Marcelo M. Brigido
A Multi-agent Tool to Annotate Biological Sequences. ICAART (2) (2011)
Guilherme P. Telles, Nalvo F. Almeida, Marcelo M. Brigido, Paulo Antonio Alvarez, Maria Emília Telles Walter
kGC: Finding Groups of Homologous Genes across Multiple Genomes. BSB (2011)
Tulio C. Silva, Pedro A. Berger, Roberto T. Arrial, Roberto C. Togawa, Marcelo M. Brigido, Maria Emília M. T. Walter
SOM-PORTRAIT: Identifying Non-coding RNAs Using Self-Organizing Maps. BSB (2009)
Roberto T. Arrial, Roberto C. Togawa, Marcelo M. Brigido
Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus Paracoccidioides brasiliensis. BMC Bioinform. 10 (2009)
Célia Ghedini Ralha, Hugo W. Schneider, Lucas O. da Fonseca, Maria Emília M. T. Walter, Marcelo M. Brigido
Using BioAgentsfor Supporting Manual Annotation on Genome Sequencing Projects. BSB (2008)
Roberto T. Arrial, Roberto C. Togawa, Marcelo M. Brigido
Outlining a Strategy for Screening Non-coding RNAs on a Transcriptome Through Support Vector Machines. BSB (2007)
Daniel A. S. Anjos, Gustavo G. Zerlotini, Guilherme A. Pinto, Maria Emília Telles Walter, Marcelo M. Brigido, Guilherme P. Telles, Carlos Juliano M. Viana, Nalvo F. Almeida
A Method for Inferring Biological Functions Using Homologous Genes Among Three Genomes. BSB (2007)
Guilherme P. Telles, Marcelo M. Brigido, Nalvo F. Almeida, Carlos Juliano M. Viana, Daniel A. S. Anjos, Maria Emília Telles Walter
A Method for Comparing Three Genomes. BSB (2005)
Daniel A. S. Anjos, Rodrigo Coimbra, Shana Santos, Maria Jose Carvalho, Marcelo M. Brigido, Maria Emília Telles Walter
A program to visualize multiple alignments. WOB (2004)