Laura Bonati

Publication Activity (10 Years)

Years Active: 2007-2023
Publications (10 Years): 4

Top Topics

Top Venues

J. Chem. Inf. Model.

PLoS Comput. Biol.

Publications

Bharath Raghavan, Mirko Paulikat, Katya Ahmad, Lara Callea, Andrea Rizzi, Emiliano Ippoliti, Davide Mandelli, Laura Bonati, Marco de Vivo, Paolo Carloni
Drug Design in the Exascale Era: A Perspective from Massively Parallel QM/MM Simulations. J. Chem. Inf. Model. 63 (12) (2023)
Stefano Motta, Claudia Minici, Dario Corrada, Laura Bonati, Alessandro Pandini
Ligand-induced perturbation of the HIF-2α: ARNT dimer dynamics. PLoS Comput. Biol. 14 (2) (2018)
Stefano Motta, Laura Bonati
Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches. J. Chem. Inf. Model. 57 (7) (2017)
Dario Corrada, Anatoly A. Soshilov, Michael S. Denison, Laura Bonati
Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR: ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation. PLoS Comput. Biol. 12 (6) (2016)
Domenico Fraccalvieri, Laura Bonati, Fabio Stella
Self Organizing Maps to efficiently cluster and functionally interpret protein conformational ensembles. WIVACE (2013)
Domenico Fraccalvieri, Alessandro Pandini, Fabio Stella, Laura Bonati
Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps. BMC Bioinform. 12 (2011)
Annalisa Bordogna, Alessandro Pandini, Laura Bonati
Predicting the accuracy of protein-ligand docking on homology models. J. Comput. Chem. 32 (1) (2011)
Ilaria Motto, Annalisa Bordogna, Anatoly A. Soshilov, Michael S. Denison, Laura Bonati
New Aryl Hydrocarbon Receptor Homology Model Targeted To Improve Docking Reliability. J. Chem. Inf. Model. 51 (11) (2011)
Alessandro Pandini, Laura Bonati, Franca Fraternali, Jens Kleinjung
MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database. Bioinform. 23 (4) (2007)