Krzysztof Kotowski

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Domain Knowledge

Magnetic Resonance Images

Top Venues

BrainLes@MICCAI (2)

Comput. Biol. Medicine

BrainLes@MICCAI

Publications

Krzysztof Kotowski, Irena Roterman, Katarzyna Stapor
Protein intrinsic disorder prediction using Attention U-Net and ProtTrans protein language model. CoRR (2024)
Bogdan Ruszczak, Krzysztof Kotowski, David Evans, Jakub Nalepa
The OPS-SAT benchmark for detecting anomalies in satellite telemetry. CoRR (2024)
Krzysztof Kotowski, Christoph Haskamp, Jacek Andrzejewski, Bogdan Ruszczak, Jakub Nalepa, Daniel Lakey, Peter Collins, Aybike Kolmas, Mauro Bartesaghi, Jose Martinez-Heras, Gabriele De Canio
European Space Agency Benchmark for Anomaly Detection in Satellite Telemetry. CoRR (2024)
Bogdan Ruszczak, Krzysztof Kotowski, Jacek Andrzejewski, Christoph Haskamp, Jakub Nalepa
OXI: An online tool for visualization and annotation of satellite time series data. SoftwareX 23 (2023)
Jakub Nalepa, Krzysztof Kotowski, Bartosz Machura, Szymon Adamski, Oskar Bozek, Bartosz Eksner, Bartosz Kokoszka, Tomasz Pekala, Mateusz Radom, Marek Strzelczak, Lukasz Zarudzki, Agata Krason, Filippo Arcadu, Jean Tessier
Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patients. Comput. Biol. Medicine 154 (2023)
Krzysztof Kotowski, Damian Kucharski, Bartosz Machura, Szymon Adamski, Benjamín Gutiérrez-Becker, Agata Krason, Lukasz Zarudzki, Jean Tessier, Jakub Nalepa
Detecting liver cirrhosis in computed tomography scans using clinically-inspired and radiomic features. Comput. Biol. Medicine 152 (2023)
Bogdan Ruszczak, Krzysztof Kotowski, Jacek Andrzejewski, Alicja Musial, David Evans, Vladimir Zelenevskiy, Sam Bammens, Rodrigo Laurinovics, Jakub Nalepa
Machine Learning Detects Anomalies in OPS-SAT Telemetry. ICCS (1) (2023)
Krzysztof Kotowski, Jeremi Ochab, Katarzyna Stapor, Werner Sommer
The importance of ocular artifact removal in single-trial ERP analysis: The case of the N250 in face learning. Biomed. Signal Process. Control. 79 (Part) (2023)
Krzysztof Kotowski, Szymon Adamski, Bartosz Machura, Lukasz Zarudzki, Jakub Nalepa
Infusing Domain Knowledge into nnU-Nets for Segmenting Brain Tumors in MRI. BrainLes@MICCAI (2022)
Jakub Nalepa, Szymon Adamski, Krzysztof Kotowski, Sylwia Chelstowska, Magdalena Machnikowska-Sokolowska, Oskar Bozek, Agata Wisz, Elzbieta Jurkiewicz
Segmenting pediatric optic pathway gliomas from MRI using deep learning. Comput. Biol. Medicine 142 (2022)
Krzysztof Kotowski, Bartosz Machura, Jakub Nalepa
Robustifying Automatic Assessment of Brain Tumor Progression from MRI. BrainLes@MICCAI (2022)
Jakub Nalepa, Krzysztof Kotowski, Bartosz Machura, Szymon Adamski, Oskar Bozek, Bartosz Eksner, Bartosz Kokoszka, Tomasz Pekala, Mateusz Radom, Marek Strzelczak, Lukasz Zarudzki, Agata Krason, Filippo Arcadu, Jean Tessier
Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patients. CoRR (2022)
Krzysztof Kotowski, Szymon Adamski, Bartosz Machura, Wojciech Malara, Lukasz Zarudzki, Jakub Nalepa
Federated Evaluation of nnU-Nets Enhanced with Domain Knowledge for Brain Tumor Segmentation. BrainLes@MICCAI (2) (2022)
Katarzyna Stapor, Krzysztof Kotowski, Tomasz Smolarczyk, Irena Roterman
Lightweight ProteinUnet2 network for protein secondary structure prediction: a step towards proper evaluation. BMC Bioinform. 23 (1) (2022)
Krzysztof Kotowski, Szymon Adamski, Bartosz Machura, Lukasz Zarudzki, Jakub Nalepa
Coupling nnU-Nets with Expert Knowledge for Accurate Brain Tumor Segmentation from MRI. BrainLes@MICCAI (2) (2021)
Krzysztof Kotowski, Tomasz Smolarczyk, Irena Roterman-Konieczna, Katarzyna Stapor
ProteinUnet - An efficient alternative to SPIDER3-single for sequence-based prediction of protein secondary structures. J. Comput. Chem. 42 (1) (2021)
Jakub Nalepa, Pablo Ribalta Lorenzo, Michal Marcinkiewicz, Barbara Bobek-Billewicz, Pawel Wawrzyniak, Maksym Walczak, Michal Kawulok, Wojciech Dudzik, Krzysztof Kotowski, Izabela Burda, Bartosz Machura, Grzegorz Mrukwa, Pawel Ulrych, Michael P. Hayball
Fully-automated deep learning-powered system for DCE-MRI analysis of brain tumors. Artif. Intell. Medicine 102 (2020)
Krzysztof Kotowski, Szymon Adamski, Wojciech Malara, Bartosz Machura, Lukasz Zarudzki, Jakub Nalepa
Segmenting Brain Tumors from MRI Using Cascaded 3D U-Nets. BrainLes@MICCAI (2) (2020)
Krzysztof Kotowski, Jakub Nalepa, Wojciech Dudzik
Detection and Segmentation of Brain Tumors from MRI Using U-Nets. BrainLes@MICCAI (2) (2019)
Krzysztof Kotowski, Katarzyna Stapor
Deep Learning Features for Face Age Estimation: Better Than Human? BDAS (2018)