Katarzyna Stapor

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 17

Top Topics

Discriminant Analysis

Protein Structure

Top Venues

Bio Algorithms Med Syst.

Publications

Krzysztof Kotowski, Irena Roterman, Katarzyna Stapor
Protein intrinsic disorder prediction using Attention U-Net and ProtTrans protein language model. CoRR (2024)
Irena Roterman, Katarzyna Stapor, Leszek Konieczny
Role of environmental specificity in CASP results. BMC Bioinform. 24 (1) (2023)
Irena Roterman, Katarzyna Stapor, Leszek Konieczny
Ab initio protein structure prediction: the necessary presence of external force field as it is delivered by Hsp40 chaperone. BMC Bioinform. 24 (1) (2023)
Krzysztof Kotowski, Jeremi Ochab, Katarzyna Stapor, Werner Sommer
The importance of ocular artifact removal in single-trial ERP analysis: The case of the N250 in face learning. Biomed. Signal Process. Control. 79 (Part) (2023)
Katarzyna Stapor, Krzysztof Kotowski, Tomasz Smolarczyk, Irena Roterman
Lightweight ProteinUnet2 network for protein secondary structure prediction: a step towards proper evaluation. BMC Bioinform. 23 (1) (2022)
Katarzyna Stapor, Pawel Ksieniewicz, Salvador García, Michal Wozniak
How to design the fair experimental classifier evaluation. Appl. Soft Comput. 104 (2021)
Krzysztof Kotowski, Tomasz Smolarczyk, Irena Roterman-Konieczna, Katarzyna Stapor
ProteinUnet - An efficient alternative to SPIDER3-single for sequence-based prediction of protein secondary structures. J. Comput. Chem. 42 (1) (2021)
Mateusz Banach, Katarzyna Stapor, Piotr Fabian, Leszek Konieczny, Irena Roterman
Divergence Entropy-Based Evaluation of Hydrophobic Core in Aggressive and Resistant Forms of Transthyretin. Entropy 23 (4) (2021)
Piotr Fabian, Katarzyna Stapor, Mateusz Banach, Magdalena Ptak-Kaczor, Leszek Konieczny, Irena Roterman
Alternative Hydrophobic Core in Proteins - The Effect of Specific Synergy. Symmetry 12 (2) (2020)
Mateusz Banach, Piotr Fabian, Katarzyna Stapor, Leszek Konieczny, Magdalena Ptak-Kaczor, Irena Roterman
The Status of Edge Strands in Ferredoxin-Like Fold. Symmetry 12 (6) (2020)
Tomasz Smolarczyk, Katarzyna Stapor, Irena Roterman-Konieczna
Backbone dihedral angles prediction servers for protein early-stage structure prediction. Bio Algorithms Med Syst. 15 (4) (2019)
Krzysztof Kotowski, Katarzyna Stapor
Deep Learning Features for Face Age Estimation: Better Than Human? BDAS (2018)
Piotr Fabian, Katarzyna Stapor
Developing an SVM classifier for extended ES protein structure prediction. FedCSIS (2017)
Katarzyna Stapor
Evaluating and Comparing Classifiers: Review, Some Recommendations and Limitations. CORES (2017)
Katarzyna Stapor
Evaluation of classifiers: current methods and future research directions. FedCSIS (Position Papers) (2017)
Wieslaw Chmielnicki, Katarzyna Stapor
Using the one-versus-rest strategy with samples balancing to improve pairwise coupling classification. Int. J. Appl. Math. Comput. Sci. 26 (1) (2016)
Katarzyna Stapor, Piotr Fabian
Classification of Protein Interactions Based on Sparse Discriminant Analysis and Energetic Features. CISIM (2016)
Barbara Kalinowska, Piotr Fabian, Katarzyna Stapor, Irena Roterman
Statistical dictionaries for hypothetical in silico model of the early-stage intermediate in protein folding. J. Comput. Aided Mol. Des. 29 (7) (2015)
Wieslaw Chmielnicki, Katarzyna Stapor
Combining One-Versus-One and One-Versus-All Strategies to Improve Multiclass SVM Classifier. CORES (2015)
Irena Roterman-Konieczna, Piotr Fabian, Katarzyna Stapor
A method of predicting the secondary protein structure based on dictionaries. Bio Algorithms Med Syst. 11 (3) (2015)
Katarzyna Stapor
Protein fold classification based on machine learning paradigm - a review. Bio Algorithms Med Syst. 8 (1) (2012)
Wieslaw Chmielnicki, Irena Roterman-Konieczna, Katarzyna Stapor
An improved protein fold recognition with support vector machines. Expert Syst. J. Knowl. Eng. 29 (2) (2012)
Wieslaw Chmielnicki, Katarzyna Stapor
A hybrid discriminative/generative approach to protein fold recognition. Neurocomputing 75 (1) (2012)
Wieslaw Chmielnicki, Katarzyna Stapor
A combined SVM-RDA classifier for protein fold recognition. Bio Algorithms Med Syst. 7 (1) (2011)
Wieslaw Chmielnicki, Katarzyna Stapor
An Effective Feature Selection Algorithm Based on the Class Similarity Used with a SVM-RDA Classifier to Protein Fold Recognition. HAIS (2) (2011)
Wieslaw Chmielnicki, Katarzyna Stapor
Protein Fold Recognition with Combined SVM-RDA Classifier. HAIS (1) (2010)
Wieslaw Chmielnicki, Katarzyna Stapor, Irena Roterman-Konieczna
An Efficient Multi-class Support Vector Machine Classifier for Protein Fold Recognition. IWPACBB (2010)
Wieslaw Chmielnicki, Katarzyna Stapor
A combined SVM-RDA classifier for protein fold recognition. Bio Algorithms Med Syst. 6 (12-S) (2010)
Karol Kozak, Katarzyna Stapor
Classes of Kernels for Hit Definition in Compound Screening. ICAISC (2008)
Karol Kozak, Marta Kozak, Katarzyna Stapor
Kernels for Chemical Compounds in Biological Screening. ICANNGA (2) (2007)
Katarzyna Stapor, Adrian Brueckner
Mean Shift Segmentation, Genetic Algorithms and Support Vector Machines for Identification of Glaucoma in Fundus Eye Images. CORES (2005)
Katarzyna Stapor, Adrian Brueckner, Adam Switonski
Mathematical Morphology and Support Vector Machines for Diagnosis of Glaucoma on Fundus eye Images. ICCVG (2004)
Katarzyna Stapor, Adam Switonski, Radim Chrástek, Georg Michelson
Segmentation of Fundus Eye Images Using Methods of Mathematical Morphology for Glaucoma Diagnosis. International Conference on Computational Science (2004)
Katarzyna Stapor, Leslaw Pawlaczyk, Radim Chrástek, Georg Michelson
Automatic Detection of Glaucomatous Changes Using Adaptive Thresholding and Neural Networks. International Conference on Computational Science (2004)
Katarzyna Stapor, Leslaw Pawlaczyk, Radim Chrástek, Heinrich Niemann, Georg Michelson
Automatic Segmentation and Classification of Fundus Eye Images for Glaucoma Diagnosis. Bildverarbeitung für die Medizin (2004)