Kristen M. Naegle

Publication Activity (10 Years)

Years Active: 2011-2021
Publications (10 Years): 4

Top Topics

Biological Data

Straight Forward

Ensemble Clustering

Top Venues

PLoS Comput. Biol.

Briefings Bioinform.

J. Mach. Learn. Res.

Nucleic Acids Res.

Publications

Bingjie Xue, Benjamin Jordan, Saqib Rizvi, Kristen M. Naegle
KinPred: A unified and sustainable approach for harnessing proteome-level human kinase-substrate predictions. PLoS Comput. Biol. 17 (2) (2021)
Kristen M. Naegle
Ten simple rules for effective presentation slides. PLoS Comput. Biol. 17 (12) (2021)
Arshag D. Mooradian, Sjoerd van der Post, Kristen M. Naegle, Jason M. Held
ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis. PLoS Comput. Biol. 16 (3) (2020)
Tom Ronan, Shawn Anastasio, Zhijie Qi, Pedro Henrique S. Vieira Tavares, Roman Sloutsky, Kristen M. Naegle
OpenEnsembles: A Python Resource for Ensemble Clustering. J. Mach. Learn. Res. 19 (2018)
Matthew K. Matlock, Alex S. Holehouse, Kristen M. Naegle
ProteomeScout: a repository and analysis resource for post-translational modifications and proteins. Nucleic Acids Res. 43 (Database-Issue) (2015)
Roman Sloutsky, Nicolas Jimenez, S. Joshua Swamidass, Kristen M. Naegle
Accounting for noise when clustering biological data. Briefings Bioinform. 14 (4) (2013)
Kristen M. Naegle, Roy E. Welsch, Michael B. Yaffe, Forest M. White, Douglas A. Lauffenburger
MCAM: Multiple Clustering Analysis Methodology for Deriving Hypotheses and Insights from High-Throughput Proteomic Datasets. PLoS Comput. Biol. 7 (7) (2011)