Katie L. Ovens

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 11

Top Topics

Learning Models

Quantitative Evaluation

Medical Image Segmentation

Top Venues

Publications

Jaden Myers, Keyhan Najafian, Farhad Maleki, Katie L. Ovens
Modified CycleGAN for the synthesization of samples for wheat head segmentation. CoRR (2024)
Farhad Maleki, Linda Moy, Reza Forghani, Tapotosh Ghosh, Katie L. Ovens, Steve Langer, Pouria Rouzrokh, Bardia Khosravi, Ali Ganjizadeh, Daniel Warren, Roxana Daneshjou, Mana Moassefi, Atlas Haddadi Avval, Susan Sotardi, Neil A. Tenenholtz, Felipe Kitamura, Timothy Kline
RIDGE: Reproducibility, Integrity, Dependability, Generalizability, and Efficiency Assessment of Medical Image Segmentation Models. CoRR (2024)
Andrew Heschl, Hosein Beheshtifard, Phuong Thao Nguyen, Tapotosh Ghosh, Katie L. Ovens, Farhad Maleki
Deep Learning-Based Hierarchical Delineation of Kidneys, Tumors, and Cysts in CT Images. KiTS@MICCAI (2023)
Farhad Maleki, Katie L. Ovens, Rajiv Gupta, Caroline Reinhold, Alan Spatz, Reza Forghani
Generalizability of Machine Learning Models: Quantitative Evaluation of Three Methodological Pitfalls. CoRR (2022)
Katie L. Ovens, Farhad Maleki, B. Frank Eames, Ian McQuillan
Juxtapose: a gene-embedding approach for comparing co-expression networks. BMC Bioinform. 22 (1) (2021)
Farhad Maleki, Kevin Cote, Keyhan Najafian, Katie L. Ovens, Yan Miao, Rita Zakarian, Caroline Reinhold, Reza Forghani, Peter Savadjiev, Zu-hua Gao
A Deep Learning-Based Pipeline for Celiac Disease Diagnosis Using Histopathological Images. CAIP (1) (2021)
Katie L. Ovens, B. Frank Eames, Ian McQuillan
The impact of sample size and tissue type on the reproducibility of gene co-expression networks. BCB (2020)
Farhad Maleki, Katie L. Ovens, Ian McQuillan, Elham Rezaei, Alan M. Rosenberg, Anthony J. Kusalik
Gene Set Databases: A Fountain of Knowledge or a Siren Call? BCB (2019)
Farhad Maleki, Katie L. Ovens, Elham Rezaei, Alan M. Rosenberg, Anthony J. Kusalik
Method Choice in Gene Set Analysis Has Important Consequences for Analysis Outcome. BIOINFORMATICS (2019)
Farhad Maleki, Katie L. Ovens, Daniel J. Hogan, Elham Rezaei, Alan M. Rosenberg, Anthony J. Kusalik
Measuring consistency among gene set analysis methods: A systematic study. J. Bioinform. Comput. Biol. 17 (5) (2019)
Farhad Maleki, Katie L. Ovens, Ian McQuillan, Anthony J. Kusalik
Sample Size and Reproducibility of Gene Set Analysis. BIBM (2018)