Ian McQuillan

ORCID

Publication Activity (10 Years)

Years Active: 2002-2024
Publications (10 Years): 84

Top Venues

Publications

Oscar H. Ibarra, Ian McQuillan
Techniques for Showing the Decidability of the Boundedness Problem of Language Acceptors. CoRR (2024)
Nazifa Azam Khan, Mikolaj Cieslak, Ian McQuillan
Improving Deep Learning Predictions with Simulated Images, and Vice Versa. CoRR (2024)
Oscar H. Ibarra, Ian McQuillan
Techniques for Showing the Decidability of the Boundedness Problem of Language Acceptors. DLT (2024)
Pascal Baumann, Flavio D'Alessandro, Moses Ganardi, Oscar H. Ibarra, Ian McQuillan, Lia Schütze, Georg Zetzsche
Unboundedness problems for machines with reversal-bounded counters. CoRR (2023)
Oscar H. Ibarra, Ian McQuillan
New characterizations of exponential, elementary, and non-elementary time-bounded Turing machines. Inf. Comput. 292 (2023)
Jason Bernard, Ian McQuillan
Stochastic L-system inference from multiple string sequence inputs. Soft Comput. 27 (10) (2023)
Jozef Jirásek, Ian McQuillan
Visit-Bounded Stack Automata. Theory Comput. Syst. 67 (5) (2023)
Oscar H. Ibarra, Ian McQuillan
On the Containment Problem for Deterministic Multicounter Machine Models. ATVA (1) (2023)
Pascal Baumann, Flavio D'Alessandro, Moses Ganardi, Oscar H. Ibarra, Ian McQuillan, Lia Schütze, Georg Zetzsche
Unboundedness Problems for Machines with Reversal-Bounded Counters. FoSSaCS (2023)
Oscar H. Ibarra, Ian McQuillan
On the complexity of decision problems for some classes of machines and applications. Inf. Comput. 294 (2023)
Oscar H. Ibarra, Ian McQuillan
State Grammars with Stores. CoRR (2022)
Arturo Carpi, Flavio D'Alessandro, Oscar H. Ibarra, Ian McQuillan
Relationships Between Bounded Languages, Counter Machines, Finite-Index Grammars, Ambiguity, and Commutative Regularity. CoRR (2022)
Oscar H. Ibarra, Ian McQuillan
On the Complexity of Decision Problems for Counter Machines with Applications to Coding Theory. DLT (2022)
Oscar H. Ibarra, Ian McQuillan
Semilinearity of Families of Languages. CoRR (2022)
Oscar H. Ibarra, Ian McQuillan
On Families of Full Trios Containing Counter Machine Languages. CoRR (2022)
Oscar H. Ibarra, Jozef Jirásek, Ian McQuillan, Luca Prigioniero
Space Complexity of Stack Automata Models. CoRR (2022)
Oscar H. Ibarra, Ian McQuillan
Generalizations of Checking Stack Automata: Characterizations and Hierarchies. CoRR (2022)
Jozef Jirásek, Ian McQuillan
Visit-Bounded Stack Automata. DLT (2022)
Oscar H. Ibarra, Jozef Jirásek, Ian McQuillan, Luca Prigioniero
Space Complexity of Stack Automata Models. Int. J. Found. Comput. Sci. 32 (6) (2021)
Arturo Carpi, Flavio D'Alessandro, Oscar H. Ibarra, Ian McQuillan
Relationships between bounded languages, counter machines, finite-index grammars, ambiguity, and commutative regularity. Theor. Comput. Sci. 862 (2021)
Jason Bernard, Ian McQuillan
Techniques for inferring context-free Lindenmayer systems with genetic algorithm. Swarm Evol. Comput. 64 (2021)
Ian McQuillan, Shinnosuke Seki
Preface. Nat. Comput. 20 (2) (2021)
Flavio D'Alessandro, Oscar H. Ibarra, Ian McQuillan
On finite-index indexed grammars and their restrictions. Inf. Comput. 279 (2021)
Oscar H. Ibarra, Ian McQuillan
Generalizations of Checking Stack Automata: Characterizations and Hierarchies. Int. J. Found. Comput. Sci. 32 (5) (2021)
Katie L. Ovens, Farhad Maleki, B. Frank Eames, Ian McQuillan
Juxtapose: a gene-embedding approach for comparing co-expression networks. BMC Bioinform. 22 (1) (2021)
Oscar H. Ibarra, Jozef Jirásek Jr., Ian McQuillan, Luca Prigioniero
Space Complexity of Stack Automata Models. DLT (2020)
Jason Bernard, Ian McQuillan
Inferring Temporal Parametric L-systems Using Cartesian Genetic Programming. ICTAI (2020)
Rifat Zahan, Ian McQuillan, Nathaniel D. Osgood
DNA Methylation Data to Predict Suicidal and Non-Suicidal Deaths: A Machine Learning Approach. CoRR (2020)
Oscar H. Ibarra, Ian McQuillan
On Store Languages and Applications. CoRR (2020)
Nazifa Azam Khan, Oliver A. S. Lyon, Mark G. Eramian, Ian McQuillan
A Novel Technique Combining Image Processing, Plant Development Properties, and the Hungarian Algorithm, to Improve Leaf Detection in Maize. CVPR Workshops (2020)
Katie L. Ovens, B. Frank Eames, Ian McQuillan
The impact of sample size and tissue type on the reproducibility of gene co-expression networks. BCB (2020)
Nazifa Azam Khan, Oliver A. S. Lyon, Mark G. Eramian, Ian McQuillan
A Novel Technique Combining Image Processing, Plant Development Properties, and the Hungarian Algorithm, to Improve Leaf Detection in Maize. CoRR (2020)
Jason Bernard, Ian McQuillan
Stochastic L-system Inference from Multiple String Sequence Inputs. CoRR (2020)
Oscar H. Ibarra, Ian McQuillan
Semilinearity of Families of Languages. Int. J. Found. Comput. Sci. 31 (8) (2020)
Mark Daley, Mark G. Eramian, Christopher Power, Ian McQuillan
From Helmut Jürgensen's Former Students: The Game of Informatics Research. CoRR (2019)
Oscar H. Ibarra, Ian McQuillan
On store languages and applications. Inf. Comput. 267 (2019)
Oscar H. Ibarra, Ian McQuillan, Bala Ravikumar
On counting functions and slenderness of languages. CoRR (2019)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
On the Density of Context-Free and Counter Languages. CoRR (2019)
Oscar H. Ibarra, Ian McQuillan
State grammars with stores. Theor. Comput. Sci. 798 (2019)
Farhad Maleki, Katie L. Ovens, Ian McQuillan, Elham Rezaei, Alan M. Rosenberg, Anthony J. Kusalik
Gene Set Databases: A Fountain of Knowledge or a Siren Call? BCB (2019)
Jason Bernard, Ian McQuillan
Techniques for Inferring Context-Free Lindenmayer Systems With Genetic Algorithm. CoRR (2019)
Oscar H. Ibarra, Ian McQuillan
On the Density of Languages Accepted by Turing Machines and Other Machine Models. CoRR (2019)
Oscar H. Ibarra, Ian McQuillan
On families of full trios containing counter machine languages. Theor. Comput. Sci. 799 (2019)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
Insertion Operations on Deterministic Reversal-Bounded Counter Machines. CoRR (2019)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
Insertion operations on deterministic reversal-bounded counter machines. J. Comput. Syst. Sci. 104 (2019)
Oscar H. Ibarra, Ian McQuillan, Bala Ravikumar
On counting functions and slenderness of languages. Theor. Comput. Sci. 777 (2019)
Oscar H. Ibarra, Ian McQuillan
Generalizations of Checking Stack Automata: Characterizations and Hierarchies. DLT (2018)
Oscar H. Ibarra, Ian McQuillan
On store languages of language acceptors. Theor. Comput. Sci. 745 (2018)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
On the complexity and decidability of some problems involving shuffle. Inf. Comput. 259 (2) (2018)
Oscar H. Ibarra, Ian McQuillan
On the Density of Languages Accepted by Turing Machines and Other Machine Models. J. Autom. Lang. Comb. 23 (1-3) (2018)
Rifat Zahan, Ian McQuillan, Nathaniel Osgood
DNA Methylation Data to Predict Suicidal and Non-Suicidal Deaths: A Machine Learning Approach. ICHI (2018)
Jason Bernard, Ian McQuillan
New Techniques for Inferring L-systems Using Genetic Algorithm. BIOMA (2018)
Mark Daley, Mark G. Eramian, Christopher Power, Ian McQuillan
From Helmut Jürgensen's Former Students: The Game of Informatics Research. J. Autom. Lang. Comb. 23 (1-3) (2018)
Ian McQuillan, Jason Bernard, Przemyslaw Prusinkiewicz
Algorithms for Inferring Context-Sensitive L-Systems. UCNC (2018)
Oscar H. Ibarra, Ian McQuillan, Bala Ravikumar
On Counting Functions of Languages. DLT (2018)
Farhad Maleki, Katie L. Ovens, Ian McQuillan, Anthony J. Kusalik
Sample Size and Reproducibility of Gene Set Analysis. BIBM (2018)
Oscar H. Ibarra, Ian McQuillan
Variations of checking stack automata: Obtaining unexpected decidability properties. Theor. Comput. Sci. 738 (2018)
Oscar H. Ibarra, Ian McQuillan
State Grammars with Stores. DCFS (2018)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
On the Density of Context-Free and Counter Languages. Int. J. Found. Comput. Sci. 29 (2) (2018)
Jason Bernard, Ian McQuillan
Inferring Stochastic L-Systems Using a Hybrid Greedy Algorithm. ICTAI (2018)
Oscar H. Ibarra, Ian McQuillan
Semilinearity of Families of Languages. CIAA (2018)
Jason Bernard, Ian McQuillan
A Fast and Reliable Hybrid Approach for Inferring L-systems . ALIFE (2018)
Lingling Jin, Ian McQuillan
Prediction of transposable elements evolution using tabu search. BIBM (2018)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
Deletion operations on deterministic families of automata. Inf. Comput. 256 (2017)
Oscar H. Ibarra, Ian McQuillan
Variations of Checking Stack Automata: Obtaining Unexpected Decidability Properties. CoRR (2017)
Oscar H. Ibarra, Ian McQuillan
Variations of Checking Stack Automata: Obtaining Unexpected Decidability Properties. DLT (2017)
Flavio D'Alessandro, Oscar H. Ibarra, Ian McQuillan
On Finite-Index Indexed Grammars and Their Restrictions. LATA (2017)
T. M. Rezwanul Islam, Ian McQuillan
CSA-X: Modularized Constrained Multiple Sequence Alignment. AlCoB (2017)
Jason Bernard, Ian McQuillan
New Techniques for Inferring L-Systems Using Genetic Algorithm. CoRR (2017)
Oscar H. Ibarra, Ian McQuillan
On Store Languages of Language Acceptors. CoRR (2017)
Nazifa Azam Khan, Ian McQuillan
Descrambling Order Analysis in Ciliates. UCNC (2017)
Oscar H. Ibarra, Ian McQuillan
On Families of Full Trios Containing Counter Machine Languages. DLT (2016)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
On the Complexity and Decidability of Some Problems Involving Shuffle. CoRR (2016)
Flavio D'Alessandro, Oscar H. Ibarra, Ian McQuillan
On Finite-Index Indexed Grammars and Their Restrictions. CoRR (2016)
Lingling Jin, Ian McQuillan, Longhai Li
Computational identification of regions that influence activity of transposable elements in the human genome. BIBM (2016)
Lingling Jin, Ian McQuillan
Computational modelling of interruptional activities between transposable elements using grammars and the linear ordering problem. Soft Comput. 20 (1) (2016)
Oscar H. Ibarra, Ian McQuillan
On Bounded Semilinear Languages, Counter Machines, and Finite-Index ET0L. CIAA (2016)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
Deletion Operations on Deterministic Families of Automata. CoRR (2016)
Oscar H. Ibarra, Ian McQuillan
The effect of end-markers on counter machines and commutativity. Theor. Comput. Sci. 627 (2016)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
Insertion Operations on Deterministic Reversal-Bounded Counter Machines. LATA (2015)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
Deletion Operations on Deterministic Families of Automata. TAMC (2015)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
On the Density of Context-Free and Counter Languages. DLT (2015)
Md. Sowgat Ibne Mahmud, Ian McQuillan
Simulation of the 2JLP Gene Assembly Process in Ciliates. UCNC (2015)
Joey Eremondi, Oscar H. Ibarra, Ian McQuillan
On the Complexity and Decidability of Some Problems Involving Shuffle. DCFS (2015)
Franziska Biegler, Ian McQuillan
On Comparing Deterministic Finite Automata and the Shuffle of Words. CIAA (2014)
Lingling Jin, Ian McQuillan
Computational Modelling of the Interruptional Activities between Transposable Elements. TPNC (2013)
Markus Holzer, Sebastian Jakobi, Ian McQuillan
Generalized Derivations with Synchronized Context-Free Grammars. Developments in Language Theory (2012)
Franziska Biegler, Mark Daley, Ian McQuillan
Algorithmic decomposition of shuffle on words. Theor. Comput. Sci. 454 (2012)
Ian McQuillan, Giovanni Pighizzini
Preface. Int. J. Found. Comput. Sci. 23 (1) (2012)
Mark Daley, Ian McQuillan, James M. McQuillan, Kalpana Mahalingam
Theoretical and computational properties of transpositions. Nat. Comput. 10 (2) (2011)
Jian Zhang, Ian McQuillan, Fang-Xiang Wu
Parallelizing Peptide-Spectrum scoring using modern graphics processing units. ICCABS (2011)
Jian Zhang, Ian McQuillan, Fang-Xiang Wu
Speed improvements of peptide-spectrum matching using SIMD instructions. BIBM Workshops (2010)
Mark Daley, Ian McQuillan
Modelling programmed frameshifting with frameshift machines. Nat. Comput. 9 (1) (2010)
Franziska Biegler, Mark Daley, Ian McQuillan
On the Shuffle Automaton Size for Words. J. Autom. Lang. Comb. 15 (1/2) (2010)
J. Mark Keil, Jing Liu, Ian McQuillan
Algorithmic properties of ciliate sequence alignment. Theor. Comput. Sci. 411 (6) (2010)
Helmut Jürgensen, Ian McQuillan
Homomorphisms Preserving Types of Density. Acta Cybern. 19 (2) (2009)
Franziska Biegler, Mark Daley, Ian McQuillan
On the Shuffle Automaton Size for Words DCFS (2009)
Franziska Biegler, Mark Daley, Markus Holzer, Ian McQuillan
On the uniqueness of shuffle on words and finite languages. Theor. Comput. Sci. 410 (38-40) (2009)
Mark Daley, Mark G. Eramian, Ian McQuillan
The Bag Automaton: A Model of Nondeterministic Storage. J. Autom. Lang. Comb. 13 (3/4) (2008)
Helmut Jürgensen, Ian McQuillan
Homomorphisms Preserving Types of Density. AFL (2008)

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Publication Activity (10 Years)

Top Topics

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Ian McQuillan