Karine G. Le Roch

Publication Activity (10 Years)

Years Active: 2004-2020
Publications (10 Years): 3

Top Topics

Gene Expression

High Throughput Sequencing

Gene Expression Data Analysis

Gaussian Mixture

Top Venues

J. Comput. Aided Mol. Des.

Publications

Robert D. Clark, Denise N. Morris, Gary Chinigo, Michael S. Lawless, Jacques Prudhomme, Karine G. Le Roch, Maria José Lafuente, Santiago Ferrer, Francisco Javier Gamo, Robert Gadwood, Walter S. Woltosz
Design and tests of prospective property predictions for novel antimalarial 2-aminopropylaminoquinolones. J. Comput. Aided Mol. Des. 34 (11) (2020)
David F. Read, Kate Cook, Yang Young Lu, Karine G. Le Roch, William Stafford Noble
Predicting gene expression in the human malaria parasite Plasmodium falciparum using histone modification, nucleosome positioning, and 3D localization features. PLoS Comput. Biol. 15 (9) (2019)
Anton Polishko, Md. Abid Hasan, Weihua Pan, Evelien M. Bunnik, Karine G. Le Roch, Stefano Lonardi
ThIEF: Finding Genome-wide Trajectories of Epigenetics Marks. WABI (2017)
Anton Polishko, Evelien M. Bunnik, Karine G. Le Roch, Stefano Lonardi
PuFFIN - a parameter-free method to build nucleosome maps from paired-end reads. BMC Bioinform. 15 (S-9) (2014)
Elena Yavorska Harris, Nadia Ponts, Karine G. Le Roch, Stefano Lonardi
BRAT-BW: efficient and accurate mapping of bisulfite-treated reads. Bioinform. 28 (13) (2012)
Anton Polishko, Nadia Ponts, Karine G. Le Roch, Stefano Lonardi
NOrMAL: accurate nucleosome positioning using a modified Gaussian mixture model. Bioinform. 28 (12) (2012)
Orion J. Buske, Michael M. Hoffman, Nadia Ponts, Karine G. Le Roch, William Stafford Noble
Exploratory analysis of genomic segmentations with Segtools. BMC Bioinform. 12 (2011)
Elena Yavorska Harris, Nadia Ponts, Aleksandr Levchuk, Karine G. Le Roch, Stefano Lonardi
BRAT: bisulfite-treated reads analysis tool. Bioinform. 26 (19) (2010)
Elena Yavorska Harris, Nadia Ponts, Aleksandr Levchuk, Karine G. Le Roch, Stefano Lonardi
BRAT: bisulfite-treated reads analysis tool. Bioinform. 26 (4) (2010)
Elizabeth A. Winzeler, Karine G. Le Roch, Yingyao Zhou, Peter L. Blair, Muni Grainger, J. Kathleen Moch, J. David Haynes, Patricia De la Vega, Anthony A. Holder, Serge Batalov, Daniel J. Carucci
Systems biology and malaria. RECOMB (2004)