Jussi Taipale

Publication Activity (10 Years)

Years Active: 2016-2020
Publications (10 Years): 5

Top Topics

Driven Learning

Transcription Factors

Motif Discovery Algorithm

Stochastic Dominance

Top Venues

Publications

Jarkko Toivonen, Pratyush K. Das, Jussi Taipale, Esko Ukkonen
MODER2: first-order Markov modeling and discovery of monomeric and dimeric binding motifs. Bioinform. 36 (9) (2020)
Fangjie Zhu, Lucas Farnung, Eevi Kaasinen, Biswajyoti Sahu, Yimeng Yin, Bei Wei, Svetlana O. Dodonova, Kazuhiro R. Nitta, Ekaterina Morgunova, Minna Taipale, Patrick Cramer, Jussi Taipale
The interaction landscape between transcription factors and the nucleosome. Nat. 562 (7725) (2018)
Janne H. Korhonen, Kimmo Palin, Jussi Taipale, Esko Ukkonen
Fast motif matching revisited: high-order PWMs, SNPs and indels. Bioinform. 33 (4) (2017)
Jarkko Toivonen, Jussi Taipale, Esko Ukkonen
Seed-driven Learning of Position Probability Matrices from Large Sequence Sets. WABI (2017)
Tuomo Hartonen, Biswajyoti Sahu, Kashyap Dave, Teemu Kivioja, Jussi Taipale
PeakXus: comprehensive transcription factor binding site discovery from ChIP-Nexus and ChIP-Exo experiments. Bioinform. 32 (17) (2016)